Virtual Machine containing SynPUF data in OMOP CDM, a RDBS including query client, WebAPI, ATLAS, R and Python.
☆59Mar 7, 2021Updated 5 years ago
Alternatives and similar repositories for OHDSI-in-a-Box
Users that are interested in OHDSI-in-a-Box are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- Automation code and documentation for standing up the OHDSI toolstack in an AWS environment☆77May 16, 2023Updated 3 years ago
- [under development] Tools for ETL into OMOP CDM and deployment of OHDSI toolstack☆43Nov 10, 2023Updated 2 years ago
- Jupyter Notebooks and other code for 4CE data visualizations.☆14Jan 25, 2023Updated 3 years ago
- CDM Builder leveraging AWS Lambda☆21Sep 17, 2026Updated last week
- Broadsea deploys the core OHDSI technology stack (Atlas & R Hades), using cross-platform Docker container technology.☆91May 6, 2026Updated 4 months ago
- Wordpress hosting with auto-scaling - Free Trial Offer • AdFully Managed hosting for WordPress and WooCommerce businesses that need reliable, auto-scalable performance. Cloudways SafeUpdates now available.
- Web application for distributing and browsing the Standardized Vocabularies for all instances of an OMOP CDM☆77Sep 2, 2026Updated 3 weeks ago
- ☆29Jul 15, 2023Updated 3 years ago
- Automation code and documentation for deploying OHDSI CDM in Azure☆42Sep 14, 2026Updated 2 weeks ago
- An R package that facilitates access to a variety of OMOP CDM sample data sets.☆50May 22, 2025Updated last year
- Cohort definition Application Programming in R☆21Updated this week
- This is an R package and Java library for rendering parameterized SQL, and translating it to different SQL dialects.☆89Sep 18, 2026Updated last week
- Clinical Research Informatics☆13Sep 2, 2026Updated 3 weeks ago
- A tool to help improve data quality standards in observational data science.☆187Updated this week
- Automated Characterization of Health Information at Large-scale Longitudinal Evidence Systems (ACHILLES) - descriptive statistics about a…☆152Dec 2, 2025Updated 9 months ago
- Managed Database hosting by DigitalOcean • AdPostgreSQL, MySQL, MongoDB, Kafka, Valkey, and OpenSearch available. Automatically scale up storage and focus on building your apps.
- Python package for managing OHDSI clinical data models. Includes support for LLM based plain text queries, MCP server and FHIR import.☆67Sep 18, 2026Updated last week
- Hands-on Sessions 1 and 2 at the Building Interpretable AI for Digital Pathology AMLD workshop 2021☆22Apr 28, 2021Updated 5 years ago
- ETL-CDMBuilder is a repo containing a .NET Core application to perform ETL to OMOP CDM for multiple databases☆55Jan 28, 2026Updated 8 months ago
- kmdata: A Database of Reconstructed Individual Patient Level Data from 153 Oncology Clinical Trials☆15May 27, 2025Updated last year
- Cohort Generation for the OMOP Common Data Model☆15Jul 30, 2026Updated last month
- Hephaestus - ETL and ML tools for OHDSI - OMOP CDM☆13Sep 18, 2025Updated last year
- UMLS to SNOMED CT and ICD-10-CM mapping tool: A Python script for generating JSON files containing mappings between UMLS CUIs and SNOMED …☆16Feb 11, 2026Updated 7 months ago
- ETL Tool for converting datasets to OMOP CDM☆37Nov 24, 2022Updated 3 years ago
- This is an R package that implements a library of standard queries that run against the OMOP-CDM.☆18Jun 7, 2024Updated 2 years ago
- Managed Database hosting by DigitalOcean • AdPostgreSQL, MySQL, MongoDB, Kafka, Valkey, and OpenSearch available. Automatically scale up storage and focus on building your apps.
- A collaborative guidebook for reusable data best practices☆13Mar 5, 2023Updated 3 years ago
- No longer maintained. Please visit https://github.com/microsoft/bedrock-cli☆10Apr 11, 2020Updated 6 years ago
- Main OMOPonFHIR Settings☆47Feb 11, 2022Updated 4 years ago
- An R package for performing various cohort diagnostics.☆55Aug 26, 2026Updated last month
- ☆14Jun 15, 2026Updated 3 months ago
- ☆23Mar 28, 2025Updated last year
- Repository of OHDSI Collaborative Research Protocols☆42Apr 25, 2023Updated 3 years ago
- A simple interface to inspect, improve and add concepts to biomedical NER+L -> MedCAT.☆85Sep 4, 2025Updated last year
- Python package for machine learning for healthcare using a OMOP common data model☆111Jun 17, 2023Updated 3 years ago
- Virtual machines for every use case on DigitalOcean • AdGet dependable uptime with 99.99% SLA, simple security tools, and predictable monthly pricing with DigitalOcean's virtual machines, called Droplets.
- ☆26Feb 3, 2025Updated last year
- A modern, lightweight medication sig parser.☆12Jan 21, 2025Updated last year
- ATLAS is an open source software tool for researchers to conduct scientific analyses on standardized observational data☆323Sep 16, 2026Updated last week
- ☆13Feb 5, 2026Updated 7 months ago
- Health Analytics Data-to-Evidence Suite (HADES): A collection of R packages for performing analytics against the Common Data Model.☆30Sep 17, 2026Updated last week
- ☆12Nov 14, 2025Updated 10 months ago
- ACT COVID Ontology☆15Sep 30, 2021Updated 4 years ago