Virtual Machine containing SynPUF data in OMOP CDM, a RDBS including query client, WebAPI, ATLAS, R and Python.
☆59Mar 7, 2021Updated 5 years ago
Alternatives and similar repositories for OHDSI-in-a-Box
Users that are interested in OHDSI-in-a-Box are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- Automation code and documentation for standing up the OHDSI toolstack in an AWS environment☆77May 16, 2023Updated 3 years ago
- [under development] Tools for ETL into OMOP CDM and deployment of OHDSI toolstack☆43Nov 10, 2023Updated 2 years ago
- Jupyter Notebooks and other code for 4CE data visualizations.☆13Jan 25, 2023Updated 3 years ago
- CDM Builder leveraging AWS Lambda☆21Updated this week
- Broadsea deploys the core OHDSI technology stack (Atlas & R Hades), using cross-platform Docker container technology.☆91May 6, 2026Updated 2 months ago
- Deploy on Railway without the complexity - Free Credits Offer • AdConnect your repo and Railway handles the rest with instant previews. Quickly provision container image services, databases, and storage volumes.
- Web application for distributing and browsing the Standardized Vocabularies for all instances of an OMOP CDM☆76Aug 28, 2025Updated 11 months ago
- ☆29Jul 15, 2023Updated 3 years ago
- An R package that facilitates access to a variety of OMOP CDM sample data sets.☆49May 22, 2025Updated last year
- Workproducts to ETL CMS datasets into OMOP Common Data Model☆103Mar 19, 2022Updated 4 years ago
- Cohort definition Application Programming in R☆21Updated this week
- This is an R package and Java library for rendering parameterized SQL, and translating it to different SQL dialects.☆87Mar 25, 2026Updated 4 months ago
- Clinical Research Informatics☆13Aug 23, 2023Updated 2 years ago
- A tool to help improve data quality standards in observational data science.☆181May 18, 2026Updated 2 months ago
- Automated Characterization of Health Information at Large-scale Longitudinal Evidence Systems (ACHILLES) - descriptive statistics about a…☆149Dec 2, 2025Updated 7 months ago
- Managed hosting for WordPress and PHP on Cloudways • AdManaged hosting for WordPress, Magento, Laravel, or PHP apps, on multiple cloud providers. Deploy in minutes on Cloudways by DigitalOcean.
- Python package for managing OHDSI clinical data models. Includes support for LLM based plain text queries, MCP server and FHIR import.☆64Updated this week
- ETL-CDMBuilder is a repo containing a .NET Core application to perform ETL to OMOP CDM for multiple databases☆56Jan 28, 2026Updated 6 months ago
- Updated LaTeX template for UNC dissertations based on Björn Brandenburg's template☆15May 12, 2020Updated 6 years ago
- UMLS to SNOMED CT and ICD-10-CM mapping tool: A Python script for generating JSON files containing mappings between UMLS CUIs and SNOMED …☆16Feb 11, 2026Updated 5 months ago
- ETL Tool for converting datasets to OMOP CDM☆37Nov 24, 2022Updated 3 years ago
- Cohort Generation for the OMOP Common Data Model☆15Updated this week
- This is an R package that implements a library of standard queries that run against the OMOP-CDM.☆18Jun 7, 2024Updated 2 years ago
- A collaborative guidebook for reusable data best practices☆13Mar 5, 2023Updated 3 years ago
- No longer maintained. Please visit https://github.com/microsoft/bedrock-cli☆10Apr 11, 2020Updated 6 years ago
- AI Agents on DigitalOcean Gradient AI Platform • AdBuild production-ready AI agents using customizable tools or access multiple LLMs through a single endpoint. Create custom knowledge bases or connect external data.
- Definition and DDLs for the OMOP Common Data Model (CDM)☆1,067Jul 21, 2026Updated last week
- OHDSI WebAPI contains all OHDSI services that can be called from OHDSI applications☆151Jul 16, 2026Updated last week
- Main OMOPonFHIR Settings☆47Feb 11, 2022Updated 4 years ago
- PCORnet Ontology to OMOP - beta!☆11Feb 7, 2024Updated 2 years ago
- An R package for performing various cohort diagnostics.☆51Jul 16, 2026Updated last week
- ☆14Jun 15, 2026Updated last month
- ☆23Mar 28, 2025Updated last year
- Streamlined Data Mapping to OMOP☆24Apr 27, 2026Updated 3 months ago
- A simple interface to inspect, improve and add concepts to biomedical NER+L -> MedCAT.☆85Sep 4, 2025Updated 10 months ago
- Deploy open-source AI quickly and easily - Special Bonus Offer • AdRunpod Hub is built for open source. One-click deployment and autoscaling endpoints without provisioning your own infrastructure.
- Python package for machine learning for healthcare using a OMOP common data model☆111Jun 17, 2023Updated 3 years ago
- ☆25Feb 3, 2025Updated last year
- ATLAS is an open source software tool for researchers to conduct scientific analyses on standardized observational data☆318Jul 22, 2026Updated last week
- ☆13Feb 5, 2026Updated 5 months ago
- ☆12Nov 14, 2025Updated 8 months ago
- Automatically exported from code.google.com/p/probab☆22Sep 14, 2015Updated 10 years ago
- ACT COVID Ontology☆15Sep 30, 2021Updated 4 years ago