OHDSI / OHDSI-in-a-BoxLinks
Virtual Machine containing SynPUF data in OMOP CDM, a RDBS including query client, WebAPI, ATLAS, R and Python.
☆57Updated 4 years ago
Alternatives and similar repositories for OHDSI-in-a-Box
Users that are interested in OHDSI-in-a-Box are comparing it to the libraries listed below
Sorting:
- Automation code and documentation for standing up the OHDSI toolstack in an AWS environment☆75Updated 2 years ago
- Course materials for OHDSI ETL tutorial☆52Updated last month
- Workproducts to ETL CMS datasets into OMOP Common Data Model☆100Updated 3 years ago
- Broadsea deploys the core OHDSI technology stack (Atlas & R Hades), using cross-platform Docker container technology.☆84Updated 7 months ago
- [under development] Tools for ETL into OMOP CDM and deployment of OHDSI toolstack☆38Updated 2 years ago
- A package supporting the conversion from Synthea CSV to OMOP CDM☆118Updated 8 months ago
- A tool to help improve data quality standards in observational data science.☆168Updated 2 weeks ago
- Web application for distributing and browsing the Standardized Vocabularies for all instances of an OMOP CDM☆71Updated 2 months ago
- ☆30Updated 7 years ago
- Main OMOPonFHIR Settings☆45Updated 3 years ago
- ETL-CDMBuilder is a repo containing a .NET Core application to perform ETL to OMOP CDM for multiple databases☆53Updated this week
- An R package that facilitates access to a variety of OMOP CDM sample data sets.☆46Updated 5 months ago
- [under development] ETL materials to support proposal for CDM enhancements for clinical trial data☆24Updated 4 years ago
- Automated Characterization of Health Information at Large-scale Longitudinal Evidence Systems (ACHILLES) - descriptive statistics about a…☆142Updated last week
- CDM Builder leveraging AWS Lambda☆17Updated last week
- OHDSI WebAPI contains all OHDSI services that can be called from OHDSI applications☆141Updated 2 weeks ago
- The Book of OHDSI repository☆124Updated last year
- Oncology Working Group Repository☆57Updated 2 months ago
- Pilot model and converter for integration of radiology data into OMOP-CDM☆23Updated 6 years ago
- Training materials for Vocabulary & CDM Tutorial.☆22Updated 6 years ago
- WhiteRabbit is a small application that can be used to analyse the structure and contents of a database as preparation for designing an E…☆202Updated last month
- Repository for OMOP CDM conventions as defined by THEMIS. These can be reference lists of concepts, pieces of standardized code for data …☆28Updated 2 months ago
- [Under development] A dbt ETL project to convert a Synthea synthetic data set into the OMOP CDM☆34Updated last month
- Conversion from FHIR HL7 to OMOP CDM☆19Updated 9 months ago
- Usagi is an application to help create mappings between coding systems and the Vocabulary standard concepts.☆103Updated last year
- Python package for managing OHDSI clinical data models. Includes support for LLM based plain text queries, MCP server and FHIR import.☆52Updated 2 weeks ago
- ☆25Updated 9 months ago
- The PCORnet Common Data Model (CDM) Forum guidance repository contains materials intended to support implementation efforts by data partn…☆31Updated 5 years ago
- Leaf Clinical Data Explorer☆97Updated 2 weeks ago
- Data Ingestion and Harmonization☆46Updated last month