Alternatives and similar repositories for frst_python:

Users that are interested in frst_python are comparing it to the libraries listed below

• BrancoLab / imgreg2D
  2D image registration in python, using napari.
  ☆16Updated 3 years ago
• Xonxt / frst
  Implementation of Fast radial symmetry transform with OpenCV
  ☆17Updated 6 years ago
• jacobhinkle / lagomorph
  Image Registration and Computational Anatomy in PyTorch
  ☆21Updated 3 years ago
• RoysamLab / Farsight-toolkit
  A collection of tools for the analysis of biological data
  ☆12Updated 9 years ago
• smithk / cidre
  A general illumination correction method for optical microscopy.
  ☆39Updated 3 years ago
• abnan / DRMIME
  DRMIME - Differentiable Mutual Information and Matrix Exponential for Multi-Resolution Image Registration
  ☆46Updated 5 years ago
• TuragaLab / malis
  MALIS structured loss function for supervised learning of segmentation and clustering
  ☆18Updated last year
• jni / ray
  Automatic segmentation of electron microscopy volumes
  ☆31Updated 12 years ago
• pyimreg / python-register
  Linear and non-linear image registration methods, using scipy and numpy.
  ☆63Updated 12 years ago
• juglab / VoidSeg
  Notebooks for VoidSeg
  ☆16Updated 5 years ago
• arttumiettinen / pi2
  C++ library and command-line software for processing and analysis of terabyte-scale volume images locally or on a computing cluster.
  ☆54Updated this week
• fiji / bUnwarpJ
  ImageJ/Fiji plugin for consistent elastic registration of 2D images
  ☆23Updated 2 years ago
• tix209 / SOAX
  2D/3D biopolymer network extraction and quantification.
  ☆14Updated 2 years ago
• mpicbg-csbd / structured_N2V
  Code for StructN2V method and experiments
  ☆23Updated 3 years ago
• janelia-cellmap / heinrich-2021a
  Resources for Heinrich et al., 2021
  ☆18Updated 3 years ago
• funalab / QCANet
  Convolutional Neural Network-Based Instance Segmentation Algorithm to Acquire Quantitative Criteria of Early Mouse Development
  ☆31Updated last year
• brikeats / Cell-Tracking
  Python scripts for tracking cells in fluorescent microscopy.
  ☆11Updated 7 years ago
• urakubo / UNI-EM
  A unified environment for DNN-based automated segmentation of neuronal EM images
  ☆36Updated 7 months ago
• RivuletStudio / rivuletpy
  Robust 3D Neuron Tracing / General 3D tree structure extraction in Python for 3D images powered by the Rivulet2 algorithm. Pain-free Inst…
  ☆67Updated 2 years ago
• InsightSoftwareConsortium / ITKMontage
  Montaging for microscopy imaging files
  ☆30Updated last week
• funkelab / linajea
  ☆18Updated last year
• idiap / semiblindpsfdeconv
  Code for "Semi-Blind Spatially-Variant Deconvolution in Optical Microscopy with Local Point Spread Function Estimation By Use Of Convolut…
  ☆29Updated 4 years ago
• billkarsh / Alignment_Projects
  Aligner for large scale serial section image data
  ☆15Updated last year
• stardist / augmend
  simple package for augmentation of n-dimensional arrays
  ☆32Updated last year
• alexklibisz / deep-calcium
  Fast, Simple Calcium Imaging Segmentation with Fully Convolutional Networks (https://arxiv.org/abs/1707.06314)
  ☆28Updated 2 years ago
• juglab / PPN2V
  Code Implementation for the publication "Fully Unsupervised Probabilistic Noise2Void"
  ☆56Updated last year
• vessap / vessap
  Experimental code and examples for: Automated analysis of whole brain vasculature using machine learning
  ☆69Updated 3 years ago
• aAbdz / CylShapeDecomposition
  Cylindrical Shape Decomposition
  ☆16Updated 2 years ago
• juglab / DecoNoising
  ☆11Updated 4 years ago
• seung-lab / fill_voids
  Fill holes in binary 2D & 3D images fast.
  ☆17Updated last month