Alternatives and similar repositories for frst_python

Users that are interested in frst_python are comparing it to the libraries listed below

• BrancoLab / imgreg2D
  2D image registration in python, using napari.
  ☆16Updated 4 years ago
• abnan / DRMIME
  DRMIME - Differentiable Mutual Information and Matrix Exponential for Multi-Resolution Image Registration
  ☆46Updated 6 years ago
• Xonxt / frst
  Implementation of Fast radial symmetry transform with OpenCV
  ☆19Updated 7 years ago
• smithk / cidre
  A general illumination correction method for optical microscopy.
  ☆42Updated 4 years ago
• mehta-lab / microDL
  3D virtual staining with 2D and 2.5D U-Nets
  ☆31Updated 2 years ago
• jacobhinkle / lagomorph
  Image Registration and Computational Anatomy in PyTorch
  ☆21Updated 4 years ago
• funkelab / linajea
  ☆18Updated 2 years ago
• InsightSoftwareConsortium / ITKMontage
  Montaging for microscopy imaging files
  ☆30Updated 2 months ago
• MIDA-group / globalign
  Fast global mutual information-based rigid alignment in the Fourier domain
  ☆32Updated last year
• RoysamLab / Farsight-toolkit
  A collection of tools for the analysis of biological data
  ☆12Updated 9 years ago
• klasma / BaxterAlgorithms
  Software for segmentation, tracking and analysis of cells in microscope image sequences.
  ☆43Updated last year
• jni / ray
  Automatic segmentation of electron microscopy volumes
  ☆30Updated 13 years ago
• kreshuklab / spoco
  PyTorch implementation of SPOCO
  ☆32Updated last year
• juglab / HDN
  This repository hosts the code for HDN (associated with the paper https://arxiv.org/pdf/2104.01374.pdf) for pixel and structured noise re…
  ☆35Updated 2 months ago
• AllenInstitute / aics-ml-segmentation
  AICS ML Segmentation (One-Way) Mirror
  ☆27Updated 4 years ago
• abria / TeraStitcher
  A tool for fast automatic 3D-stitching of teravoxel-sized microscopy images
  ☆93Updated last year
• juglab / VoidSeg
  Notebooks for VoidSeg
  ☆17Updated 5 years ago
• juglab / pn2v
  This is our implementation of Probabilistic Noise2Void
  ☆77Updated 2 years ago
• juglab / EmbedSeg
  Code Implementation for EmbedSeg, an Instance Segmentation Method for Microscopy Images
  ☆127Updated last year
• juglab / DecoNoising
  ☆10Updated 5 years ago
• vpronina / DeepWienerRestoration
  ☆15Updated 4 years ago
• BBQuercus / deepBlink
  Threshold independent detection and localization of diffraction-limited spots.
  ☆38Updated 3 years ago
• fiji / bUnwarpJ
  ImageJ/Fiji plugin for consistent elastic registration of 2D images
  ☆25Updated 3 years ago
• lmb-freiburg / Unet-Segmentation
  The U-Net Segmentation plugin for Fiji (ImageJ)
  ☆90Updated 3 years ago
• funalab / QCANet
  Convolutional Neural Network-Based Instance Segmentation Algorithm to Acquire Quantitative Criteria of Early Mouse Development
  ☆32Updated 2 years ago
• CSBDeep / CSBDeep_website
  ☆40Updated 5 years ago
• AllenCellModeling / pytorch_fnet
  Three dimensional cross-modal image inference
  ☆161Updated 3 months ago
• lens-biophotonics / ZetaStitcher
  ZetaStitcher is a tool designed to stitch large volumetric images such as those produced by Light-Sheet Fluorescence Microscopes.
  ☆46Updated 2 months ago
• pyimreg / python-register
  Linear and non-linear image registration methods, using scipy and numpy.
  ☆63Updated 13 years ago
• spreka / biomagdsb
  This repository contains the codes to run the nuclei segmentation pipeline of the BIOMAG group inspired by Kaggle's Data Science Bowl 201…
  ☆55Updated 5 years ago