ECP-CANDLE / BenchmarksLinks
ECP-CANDLE Benchmarks
☆59Updated 9 months ago
Alternatives and similar repositories for Benchmarks
Users that are interested in Benchmarks are comparing it to the libraries listed below
Sorting:
- CUDASW++4.0: Ultra-fast GPU-based Smith-Waterman Protein Sequence Database Search☆36Updated last month
- How to use Singularity!☆67Updated 5 years ago
- definition files and wrapper scripts used by NIH HPC staff to install user-facing apps on the Biowulf cluster☆30Updated 4 years ago
- Accelerated kernel library for genomics☆106Updated 2 months ago
- DRMAA for Slurm: Implementation of the DRMAA C bindings for Slurm☆49Updated 3 months ago
- Local filesystem registry for containers (intended for HPC) using Lmod or Environment Modules. Works for users and admins.☆121Updated 3 weeks ago
- IPython magic for SLURM.☆69Updated 5 years ago
- Slurm Docker Container on CentOS 7☆88Updated last year
- ☆92Updated 6 years ago
- RADICAL-Pilot☆63Updated this week
- Scripts for viewing Slurm batch job resource usages☆11Updated 3 years ago
- A simple utility for executing multiple sequential or multi-threaded applications in a single multi-node batch job☆62Updated last year
- A repository of definition files for bootstrapping Singularity containers around the software applications, frameworks, and libraries you…☆63Updated last month
- retrieve protein sequence identifiers and metadata from http://uniprot.org☆67Updated 3 years ago
- A sample integration of AWS services with SLURM☆78Updated 2 months ago
- Model zoo for genomics☆167Updated 11 months ago
- Scripts to manage NVIDIA GPU devices in SGE 6.2u5☆25Updated 3 years ago
- Collection of tutorials for using Shifter to bring containers to HPC☆26Updated 6 years ago
- NVBIO is a library of reusable components designed to accelerate bioinformatics applications using CUDA.☆214Updated 5 years ago
- Galaxy Tool wrappers☆120Updated this week
- example singularity definition files and demos☆27Updated 7 years ago
- ☆98Updated 8 months ago
- Keras tutorial code for the SC18 tutorial on Deep Learning at Scale☆12Updated 6 years ago
- SDK for GPU accelerated genome assembly and analysis☆291Updated last year
- Scalable dynamic library and python loading in HPC environments☆100Updated this week
- LOGAN: High-Performance Multi-GPU X-Drop Long-Read Alignment.☆29Updated 2 years ago
- Intel lab's open sourced data science framework for accelerating digital biology☆48Updated 2 weeks ago
- Update EasyBuild package configuration files for R and Python bundles☆23Updated 2 months ago
- Burrow-Wheeler Aligner for short-read alignment (see minimap2 for long-read alignment)☆17Updated 2 years ago
- PharML is a framework for predicting compound affinity for protein structures. It utilizes a novel Molecular-Highway Graph Neural Network…☆13Updated 5 years ago