BIC-MNI / minc-tools
Basic minc-tools from former minc repository
☆30Updated last month
Alternatives and similar repositories for minc-tools:
Users that are interested in minc-tools are comparing it to the libraries listed below
- Version 2 of the minc-toolkit, uses tools based on ITK version 4.x☆50Updated last month
- libminc is the core library and API of the MINC toolkit☆19Updated this week
- OBSOLETE: Medical Image NetCDF, this package is now split into two parts: libminc ( https://github.com/BIC-MNI/libminc ) and minc-tools (…☆33Updated 8 years ago
- small mammals brain MRI☆16Updated last year
- defacing utility for MRI images☆113Updated last year
- A toolbox for quantitative MRI and in vivo histology using MRI (hMRI)☆62Updated this week
- Multiple Automatically Generated Templates brain segmentation algorithm☆48Updated 7 months ago
- NiiStat is a set of Matlab scripts for analyzing neuroimaging data from clinical populations☆31Updated 4 years ago
- Region- and voxel-based probabilistic mapping of whole-brain veins and arteries (densities and diameter) in the MNI space☆49Updated 2 years ago
- dMRIPrep is a robust and easy-to-use pipeline for preprocessing of diverse dMRI data. The transparent workflow dispenses of manual interv…☆65Updated last year
- Using ANTs to process multiple MR image types for a single subject☆24Updated 7 years ago
- A MATLAB toolbox for performing along-tract analysis of diffusion tensor imaging (DTI) MRI tractography data.☆43Updated 11 years ago
- atlasBREX: Automated averaged template-derived brain extraction in animal MRI☆16Updated last year
- rapidtide - a suite of programs for doing time lag correlation analysis on fMRI data☆75Updated this week
- Open source software for medical image processing from the Empenn team☆37Updated last month
- DICOM to Nifti conversion with meta data preservation☆73Updated last month
- dHCP structural pipeline☆17Updated 3 years ago
- The Sherbrooke Connectivity Imaging Lab (SCIL) Python dMRI processing toolbox☆63Updated this week
- PipeDream - open source neuroimaging pipelines☆17Updated 5 years ago
- Stand alone fMRI software suite for layer-fMRI analyses.☆91Updated 2 months ago
- GLSL surface rendering source code. Compiled versions available from NITRC. Loads 3DS, CTM, DXF, FreeSurfer, GII (GIfTI), GTS, LWO2, MS3D…☆107Updated 2 years ago
- Tools to automate simple manipulations and measurements of medical images and segmentations in nifti format.☆21Updated 7 months ago
- ☆26Updated 6 months ago
- Common workflows for MRI (anatomical, functional, diffusion, etc)☆91Updated this week
- Processing tools for high-resolution neuroimaging☆65Updated last month
- Lesion Identification with Neighborhood Data Analysis☆21Updated 4 years ago
- Python code for flexible pipeline control☆25Updated 2 years ago
- Diffusion MRI analysis and visualization in 3D Slicer open source medical imaging platform.☆78Updated last month
- VisualQC : assistive tool to ease the quality control workflow of neuroimaging data.☆73Updated 7 months ago
- Python scripts for shape analysis of neuroimaging data (wrapping around shapeDNA and FreeSurfer)☆20Updated 3 years ago