BIC-MNI / minc-toolsLinks
Basic minc-tools from former minc repository
☆33Updated last year
Alternatives and similar repositories for minc-tools
Users that are interested in minc-tools are comparing it to the libraries listed below
Sorting:
- Version 2 of the minc-toolkit, uses tools based on ITK version 4.x☆53Updated 6 months ago
- Multiple Automatically Generated Templates brain segmentation algorithm☆50Updated last year
- Python scripts for shape analysis of neuroimaging data (wrapping around shapeDNA and FreeSurfer)☆20Updated 4 years ago
- This is the repository for the BioImage Suite Web Project☆84Updated 10 months ago
- small mammals brain MRI☆15Updated 2 years ago
- Stand alone fMRI software suite for layer-fMRI analyses.☆104Updated last month
- OBSOLETE: Medical Image NetCDF, this package is now split into two parts: libminc ( https://github.com/BIC-MNI/libminc ) and minc-tools (…☆36Updated 9 years ago
- MRtrix3 provides a set of tools to perform various advanced diffusion MRI analyses, including constrained spherical deconvolution (CSD), …☆331Updated 2 weeks ago
- A framework for developing neural network models for 3D image processing.☆167Updated this week
- Automated anatomical brain label/shape analysis software (+ website)☆154Updated 4 years ago
- dMRI based fiber tracking using parallel transport tractography☆28Updated 2 weeks ago
- ☆31Updated 6 months ago
- A MATLAB toolbox for performing along-tract analysis of diffusion tensor imaging (DTI) MRI tractography data.☆49Updated 12 years ago
- VISTASOFT is the main software repository of the VISTA lab at Stanford University.☆152Updated last year
- Using ANTs to process multiple MR image types for a single subject☆26Updated 8 years ago
- DTIPrep performs a "Study-specific Protocol" based automatic pipeline for DWI/DTI quality control and preparation☆19Updated 4 years ago
- Medical image format converter: from raw Bruker ParaVision to nifti.☆31Updated last year
- Common workflows for MRI (anatomical, functional, diffusion, etc)☆106Updated this week
- DICOM to Nifti conversion with meta data preservation☆77Updated last year
- Python utilities for medical image and surface-based analysis☆38Updated 2 weeks ago
- defacing utility for MRI images☆130Updated last year
- dMRIPrep is a robust and easy-to-use pipeline for preprocessing of diverse dMRI data. The transparent workflow dispenses of manual interv…☆73Updated last month
- Clinical Toolbox for SPM (https://www.nitrc.org/projects/clinicaltbx/)☆47Updated 4 years ago
- Curated list of open-access databases with human structural MRI data☆129Updated 6 years ago
- Processing tools for high-resolution neuroimaging☆73Updated last week
- A toolbox for quantitative MRI and in vivo histology using MRI (hMRI)☆75Updated 3 weeks ago
- A Tractography Tool for Diffusion MRI☆150Updated this week
- Connectome Workbench☆213Updated this week
- Diffusion MRI analysis and visualization in 3D Slicer open source medical imaging platform.☆85Updated last week
- NiiStat is a set of Matlab scripts for analyzing neuroimaging data from clinical populations☆32Updated 5 years ago