BIC-MNI / minc-tools

Related projects ⓘ

Alternatives and complementary repositories for minc-tools

• BIC-MNI / minc
  OBSOLETE: Medical Image NetCDF, this package is now split into two parts: libminc ( https://github.com/BIC-MNI/libminc ) and minc-tools (…
  ☆33Updated 8 years ago
• BIC-MNI / minc-toolkit-v2
  Version 2 of the minc-toolkit, uses tools based on ITK version 4.x
  ☆49Updated last month
• BIC-MNI / libminc
  libminc is the core library and API of the MINC toolkit
  ☆19Updated last month
• CoBrALab / MAGeTbrain
  Multiple Automatically Generated Templates brain segmentation algorithm
  ☆48Updated 4 months ago
• moloney / dcmstack
  DICOM to Nifti conversion with meta data preservation
  ☆72Updated 4 months ago
• Deep-MI / BrainPrint-legacy
  Python scripts for shape analysis of neuroimaging data (wrapping around shapeDNA and FreeSurfer)
  ☆20Updated 3 years ago
• sammba-mri / sammba-mri
  small mammals brain MRI
  ☆16Updated last year
• DevelopingHCP / structural-pipeline
  dHCP structural pipeline
  ☆16Updated 3 years ago
• hMRI-group / hMRI-toolbox
  A toolbox for quantitative MRI and in vivo histology using MRI (hMRI)
  ☆60Updated this week
• cookpa / pipedream
  PipeDream - open source neuroimaging pipelines
  ☆17Updated 5 years ago
• jeffduda / NeuroBattery
  Using ANTs to process multiple MR image types for a single subject
  ☆24Updated 7 years ago
• SlicerDMRI / SlicerDMRI
  Diffusion MRI analysis and visualization in 3D Slicer open source medical imaging platform.
  ☆76Updated 3 months ago
• trislett / TFCE_mediation
  Fast regression and mediation analysis of vertex or voxel MRI data with TFCE
  ☆29Updated last year
• layerfMRI / LAYNII
  Stand alone fMRI software suite for layer-fMRI analyses.
  ☆85Updated last month
• braincharter / vasculature
  Region- and voxel-based probabilistic mapping of whole-brain veins and arteries (densities and diameter) in the MNI space
  ☆49Updated 2 years ago
• nipy / nilabels
  Tools to automate simple manipulations and measurements of medical images and segmentations in nifti format.
  ☆21Updated 4 months ago
• UCL / PETPVC
  Partial Volume Correction in PET
  ☆54Updated 10 months ago
• johncolby / along-tract-stats
  A MATLAB toolbox for performing along-tract analysis of diffusion tensor imaging (DTI) MRI tractography data.
  ☆41Updated 11 years ago
• MIC-DKFZ / MITK-Diffusion
  MITK Diffusion - Official part of the Medical Imaging Interaction Toolkit
  ☆79Updated 2 months ago
• cMadan / openMorph
  Curated list of open-access databases with human structural MRI data
  ☆126Updated 5 years ago
• bioimagesuiteweb / bisweb
  This is the repository for the BioImage Suite Web Project
  ☆79Updated 7 months ago
• neurolabusc / NiiStat
  NiiStat is a set of Matlab scripts for analyzing neuroimaging data from clinical populations
  ☆31Updated 4 years ago
• ofgulban / segmentator
  3D MRI data exploration and segmentation tool.
  ☆74Updated last year
• raamana / graynet
  Subject-wise networks from structural MRI, both vertex- and voxel-wise features (thickness, GM density, curvature, gyrification)
  ☆35Updated 6 months ago
• jlohmeier / atlasBREX
  atlasBREX: Automated averaged template-derived brain extraction in animal MRI
  ☆15Updated 9 months ago
• raamana / visualqc
  VisualQC : assistive tool to ease the quality control workflow of neuroimaging data.
  ☆73Updated 4 months ago
• scilus / scilpy
  The Sherbrooke Connectivity Imaging Lab (SCIL) Python dMRI processing toolbox
  ☆60Updated this week
• scilus / fibernavigator
  The original Fibernavigator: tool for vizualization of DTI and MRI data
  ☆35Updated 5 years ago
• SebastianoF / bruker2nifti
  Medical image format converter: from raw Bruker ParaVision to nifti.
  ☆31Updated 10 months ago
• frankyeh / DSI-Studio
  A Tractography Tool for Diffusion MRI
  ☆122Updated this week