Alternatives and similar repositories for minc:

Users that are interested in minc are comparing it to the libraries listed below

• CoBrALab / MAGeTbrain
  Multiple Automatically Generated Templates brain segmentation algorithm
  ☆48Updated 7 months ago
• BIC-MNI / minc-toolkit-v2
  Version 2 of the minc-toolkit, uses tools based on ITK version 4.x
  ☆51Updated 2 months ago
• cookpa / pipedream
  PipeDream - open source neuroimaging pipelines
  ☆17Updated 5 years ago
• BIC-MNI / minc-tools
  Basic minc-tools from former minc repository
  ☆30Updated 2 months ago
• davidssmith / DCEMRI.jl
  DCE MRI analysis in Julia
  ☆38Updated 3 years ago
• jeffduda / NeuroBattery
  Using ANTs to process multiple MR image types for a single subject
  ☆24Updated 7 years ago
• stnava / ANTsTutorial
  Guide to tutorial materials for ANTs/R
  ☆45Updated 6 years ago
• DevelopingHCP / structural-pipeline
  dHCP structural pipeline
  ☆17Updated 3 years ago
• BIC-MNI / minc-toolkit
  Metaproject uniting all the available minc tools
  ☆37Updated last year
• johncolby / along-tract-stats
  A MATLAB toolbox for performing along-tract analysis of diffusion tensor imaging (DTI) MRI tractography data.
  ☆43Updated 11 years ago
• nmpowell / mousemorph
  Tools for MRI mouse brain morphometry
  ☆30Updated 8 years ago
• moloney / dcmstack
  DICOM to Nifti conversion with meta data preservation
  ☆73Updated last month
• hMRI-group / hMRI-toolbox
  A toolbox for quantitative MRI and in vivo histology using MRI (hMRI)
  ☆62Updated this week
• ofgulban / segmentator
  3D MRI data exploration and segmentation tool.
  ☆74Updated last year
• Mouse-Imaging-Centre / pydpiper
  Python code for flexible pipeline control
  ☆25Updated 2 years ago
• CoBrALab / optimized_antsMultivariateTemplateConstruction
  A re-implementation of antsMultivariateTemplateConstruction2.sh using optimized image pyramid scale-space and qbatch support
  ☆23Updated last month
• cMadan / openMorph
  Curated list of open-access databases with human structural MRI data
  ☆126Updated 5 years ago
• nighres / nighres
  Processing tools for high-resolution neuroimaging
  ☆66Updated 2 months ago
• Deep-MI / BrainPrint-legacy
  Python scripts for shape analysis of neuroimaging data (wrapping around shapeDNA and FreeSurfer)
  ☆20Updated 3 years ago
• Entodi / MeshNet
  Code and model of article "End-to-end learning of brain tissue segmentation from imperfect labeling" https://arxiv.org/abs/1612.00940
  ☆16Updated 6 years ago
• rordenlab / niimath
  niimath - a clone of fslmaths. Try the live demo:
  ☆59Updated last month
• pyushkevich / greedy
  Very fast greedy diffeomorphic registration code
  ☆69Updated last month
• SebastianoF / bruker2nifti
  Medical image format converter: from raw Bruker ParaVision to nifti.
  ☆31Updated last year
• stnava / ANTsDoc
  Documentation for ANTs
  ☆15Updated 9 years ago
• CCI-Bonn / HD-BET
  Automated deep-learning based brain extraction applicable to a broad range of MRI sequence types and with robust performance even in the …
  ☆33Updated 3 years ago
• dama-lab / multi-atlas-segmentation
  Multi Atlas Segmentation and Morphometric analysis toolkit (MASMAT) for mouse brain MRI
  ☆36Updated 4 months ago
• preprocessed-connectomes-project / NFB_skullstripped
  Repository of hand corrected skullstripping for the Enhanced Rockland Sample Neurofeedback Study
  ☆19Updated 3 years ago
• NIST-MNI / nist_mni_pipelines
  NIST-MNI image processing pipelines
  ☆10Updated 2 weeks ago
• demianw / tract_querier
  Implementation of the White Matter Query Language and associated tools for dMRI white matter tract extraction and analysis
  ☆28Updated 2 weeks ago
• poldracklab / pydeface
  defacing utility for MRI images
  ☆113Updated last year