CoBrALab / minc-bpipe-libraryLinks
Library of bpipe implemented commands commonly applied to minc datafiles, suitable for importing into other pipelines
☆13Updated last year
Alternatives and similar repositories for minc-bpipe-library
Users that are interested in minc-bpipe-library are comparing it to the libraries listed below
Sorting:
- Scripts and documentation for the PCP's protocol for assessing data quality.☆41Updated 3 years ago
- VisualQC : assistive tool to ease the quality control workflow of neuroimaging data.☆73Updated 3 weeks ago
- BIDS app wrapping recon-all from FreeSurfer☆42Updated 8 months ago
- Qoala-T is a supervised-learning tool for quality control of FreeSurfer segmented MRI data☆78Updated 4 years ago
- ENIGMA HALFpipe is a user-friendly software that facilitates reproducible analysis of fMRI data☆98Updated last week
- Utility functions for working with DICOM and BIDS neuroimaging data☆62Updated last month
- Segmentations of Neuroanatomy on Hi-Res T1 and T2 MRIs and publicly available population averages in MNI space☆33Updated 2 years ago
- Tool for automatic denoising, denoising strategies comparison, and functional connectivity data quality control.☆47Updated 2 years ago
- NiiStat is a set of Matlab scripts for analyzing neuroimaging data from clinical populations☆32Updated 4 years ago
- Learn Nipype with these tutorial notebooks - go here to see them online -->☆123Updated last year
- Processing tools for high-resolution neuroimaging☆71Updated 7 months ago
- A BIDS App for minimal preprocessing using the HCP Pipelines☆36Updated 8 months ago
- A setup for automatic generation of shareable, version-controlled BIDS datasets from MR scanners☆49Updated 2 months ago
- multi atlas transfer tools for neuroimaging (maTT)☆64Updated 7 months ago
- dMRIPrep is a robust and easy-to-use pipeline for preprocessing of diverse dMRI data. The transparent workflow dispenses of manual interv…☆67Updated last year
- A Python implementation of 'dual-coding'☆42Updated last year
- Handy scripts for SPM☆74Updated 4 years ago
- Common workflows for MRI (anatomical, functional, diffusion, etc)☆99Updated last week
- MOVED TO https://github.com/nipreps/dmriprep☆17Updated 2 years ago
- Tools for mesh surface-based operations☆36Updated 4 months ago
- Optimized cerebral cortical surface mapping of neurite properties using diffsion magnetic resonace imaging (dMRI)☆13Updated 2 years ago
- niimath - a clone of fslmaths. Try the live demo:☆66Updated last week
- Intensity normalization of structural MRIs using RAVEL☆29Updated last year
- Tool for downloading ABCD_BIDS inputs and derivatives from the ABCD-BIDS NDA Collection 3165.☆24Updated 11 months ago
- The TemplateFlow Archive - A DataLad super-dataset☆86Updated last month
- This repository contains all code for the BLMM toolbox.☆20Updated last year
- TractoFlow: A robust, efficient and reproducible diffusion MRI pipeline leveraging Nextflow & Singularity☆58Updated 9 months ago
- Lesion to Symptom Mapping in R☆33Updated last year
- PET2BIDS helps you convert your PET data into BIDS! raw PET scanner files (e.g. ecat, dicom) and additional side files like .e.g excel sh…☆29Updated this week
- ICA-AROMA Software Package: a data-driven method to identify and remove head motion-related artefacts from functional MRI data.☆97Updated last year