CoBrALab / minc-bpipe-libraryLinks
Library of bpipe implemented commands commonly applied to minc datafiles, suitable for importing into other pipelines
☆13Updated last year
Alternatives and similar repositories for minc-bpipe-library
Users that are interested in minc-bpipe-library are comparing it to the libraries listed below
Sorting:
- Scripts and documentation for the PCP's protocol for assessing data quality.☆41Updated 3 years ago
- BIDS app wrapping recon-all from FreeSurfer☆43Updated this week
- VisualQC : assistive tool to ease the quality control workflow of neuroimaging data.☆74Updated 3 months ago
- Qoala-T is a supervised-learning tool for quality control of FreeSurfer segmented MRI data☆77Updated 4 years ago
- TractoFlow: A robust, efficient and reproducible diffusion MRI pipeline leveraging Nextflow & Singularity☆61Updated last year
- ENIGMA HALFpipe is a user-friendly software that facilitates reproducible analysis of fMRI data☆104Updated this week
- PET2BIDS helps you convert your PET data into BIDS! raw PET scanner files (e.g. ecat, dicom) and additional side files like .e.g excel sh…☆30Updated 2 weeks ago
- A Python implementation of 'dual-coding'☆43Updated last year
- Tools for mesh surface-based operations☆37Updated 6 months ago
- Utility functions for working with DICOM and BIDS neuroimaging data☆63Updated last month
- Common workflows for MRI (anatomical, functional, diffusion, etc)☆103Updated this week
- dMRIPrep is a robust and easy-to-use pipeline for preprocessing of diverse dMRI data. The transparent workflow dispenses of manual interv…☆70Updated last year
- For calculating exact geodesic distances on cortical surface meshes☆53Updated last year
- Fast regression and mediation analysis of vertex or voxel MRI data with TFCE☆31Updated 2 years ago
- Susceptibility Distortion Correction (SDC) workflows for EPI MR schemes☆43Updated this week
- A web service for semi-automated conversion of raw imaging data to BIDS☆31Updated 2 months ago
- ICA-AROMA Software Package: a data-driven method to identify and remove head motion-related artefacts from functional MRI data.☆101Updated last year
- Learn Nipype with these tutorial notebooks - go here to see them online -->☆126Updated last year
- Processing tools for high-resolution neuroimaging☆71Updated 10 months ago
- The TemplateFlow Archive - A DataLad super-dataset☆89Updated last month
- PALM: Permutation Analysis of Linear Models☆78Updated last week
- MOVED TO https://github.com/nipreps/dmriprep☆17Updated 2 years ago
- A BIDS App for minimal preprocessing using the HCP Pipelines☆37Updated 2 weeks ago
- Segmentations of Neuroanatomy on Hi-Res T1 and T2 MRIs and publicly available population averages in MNI space☆34Updated 2 years ago
- Handy scripts for SPM☆75Updated 5 years ago
- niimath - a clone of fslmaths. Try the live demo:☆68Updated last month
- multi atlas transfer tools for neuroimaging (maTT)☆66Updated 10 months ago
- bids application for processing functional MRI data, robust to scanner, acquisition and age variability.☆54Updated this week
- nii_preprocess adapted for LARC and ABC studies at UofSC☆22Updated 3 years ago
- BIDS App containing an instance of the SPM software.☆14Updated this week