BIC-MNI / BEaST
C implementation of Brain Extraction based on nonlocal Segmentation Technique
☆16Updated 3 years ago
Alternatives and similar repositories for BEaST:
Users that are interested in BEaST are comparing it to the libraries listed below
- Automated deep-learning based brain extraction applicable to a broad range of MRI sequence types and with robust performance even in the …☆35Updated 3 years ago
- Multi Atlas Segmentation and Morphometric analysis toolkit (MASMAT) for mouse brain MRI☆37Updated 6 months ago
- ☆18Updated 3 weeks ago
- ☆28Updated 3 years ago
- CNN-based segmentation tool for segmenting PVS on T1 and WMH on FLAIR MRI☆13Updated 3 weeks ago
- Simulate realistic diffusion-weighted MR data☆19Updated 2 years ago
- RadTract: enhanced tractometry with radiomics-based imaging biomarkers for improved predictive modelling.☆11Updated 9 months ago
- A single NIfTI image saved with all 48 spatial rotation permutations☆29Updated 3 years ago
- Code and model of article "End-to-end learning of brain tissue segmentation from imperfect labeling" https://arxiv.org/abs/1612.00940☆16Updated 7 years ago
- LGI: Cortical Shape-Adaptive Local Gyrification Index☆11Updated 4 years ago
- The Sherbrooke Connectivity Imaging Lab (SCIL) Python dMRI processing toolbox☆66Updated last week
- A MATLAB toolbox for performing along-tract analysis of diffusion tensor imaging (DTI) MRI tractography data.☆44Updated 12 years ago
- Segmentation of Choroid Plexus using Gaussian Mixture Model☆14Updated 2 weeks ago
- Multiple Automatically Generated Templates brain segmentation algorithm☆48Updated 10 months ago
- Multi-site dMRI harmonization☆47Updated last week
- Super-resolution of multimodal clinical magnetic resonance images (MRIs)☆15Updated 2 years ago
- TF2.3 DCE-/DSC-MRI processing code, collected, tested and made available to all.☆38Updated 2 months ago
- Convert tractography studies from mrtrix into dicom for use in navigation software☆15Updated last month
- Scripts to prepare MP2RAGE for Freesurfer☆27Updated last year
- perivascular space segmentation☆14Updated 2 years ago
- DICOM to NIfTI conversion, NIfTI tools☆95Updated 8 months ago
- CNN based brain masking☆16Updated last month
- Just when I thought you couldn’t possibly be any dumber, you go and do something like this… and totally redeem yourself!☆23Updated 2 months ago
- Clinical Toolbox for SPM (https://www.nitrc.org/projects/clinicaltbx/)☆45Updated 3 years ago
- AICONSlab's white matter hyperintensities (WMH) segmentation algorithm using CNNs☆17Updated 6 months ago
- Version 2 of the minc-toolkit, uses tools based on ITK version 4.x☆53Updated last month
- A re-implementation of antsMultivariateTemplateConstruction2.sh using optimized image pyramid scale-space and qbatch support☆25Updated last month
- Pipeline for Analysing Lesions after Stroke (PALS) is a scalable and user-friendly toolbox designed to facilitate standardised analysis a…☆23Updated 3 weeks ago
- AssemblyNet: 3D Whole Brain MRI segmentation pipeline☆58Updated last year
- dMRI based fiber tracking using parallel transport tractography☆26Updated last month