C implementation of Brain Extraction based on nonlocal Segmentation Technique
☆16Oct 6, 2026Updated last week
Alternatives and similar repositories for BEaST
Users that are interested in BEaST are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- NMF Code for calculating components from Brain imaging data.☆19Sep 14, 2022Updated 4 years ago
- A single NIfTI image saved with all 48 spatial rotation permutations☆31Jul 7, 2021Updated 5 years ago
- Matlab for NIFTI support☆10Dec 26, 2018Updated 7 years ago
- Python module for processing dynamic contrast enhanced magnetic resonance imaging (DCE-MRI) data☆33Apr 28, 2022Updated 4 years ago
- Multiple Automatically Generated Templates brain segmentation algorithm☆50Jun 18, 2024Updated 2 years ago
- Deploy to Railway using AI coding agents - Free Credits Offer • AdUse Claude Code, Codex, OpenCode, and more. Autonomous software development now has the infrastructure to match with Railway.
- A reimplementation of MAGeTbrain using only ANTs tools.☆17Jan 5, 2023Updated 3 years ago
- World's fastest DCE MRI analysis toolkit☆41Sep 7, 2021Updated 5 years ago
- DL+DiReCT - Direct Cortical Thickness Estimation using Deep Learning-based Anatomy Segmentation and Cortex Parcellation☆34Apr 16, 2025Updated last year
- PCA Model for Brain Extraction☆18Jan 2, 2019Updated 7 years ago
- Displays regional stats on Freesurfer surfaces in MATLAB☆16Sep 18, 2020Updated 6 years ago
- R package to implement template ICA☆11Sep 17, 2026Updated 3 weeks ago
- ☆17Updated this week
- SpinWalk, a framework for Monte-Carlo simulation to model spins random walk within a network. SpinWalk paper:☆14Mar 11, 2026Updated 7 months ago
- Repository of hand corrected skullstripping for the Enhanced Rockland Sample Neurofeedback Study☆19Feb 21, 2021Updated 5 years ago
- Deploy on Railway without the complexity - Free Credits Offer • AdConnect your repo and Railway handles the rest with instant previews. Quickly provision container image services, databases, and storage volumes.
- MindControl is an app for quality control of neuroimaging pipeline outputs. Demo:☆54Apr 26, 2019Updated 7 years ago
- WM tract atlases for the human (HCP and UK Biobank) and Macaque brain and connectivity blueprint atlases for the human (HCP) and macaque …☆21Dec 23, 2021Updated 4 years ago
- A Python implementation of Partial Least Squares (PLS) decomposition☆20Jul 14, 2021Updated 5 years ago
- Python scripts for shape analysis of neuroimaging data (wrapping around shapeDNA and FreeSurfer)☆21Feb 3, 2021Updated 5 years ago
- Neuroimgaing data processing pipelines used in the lab☆21Jul 23, 2019Updated 7 years ago
- Neuro Lesion Inpainting Tool (neuroLIT / FastSurfer-LIT) for lesion inpainting e.g. for whole brain segmentation and cortical surface rec…☆24Sep 4, 2026Updated last month
- Ironsmith is a comprehensive, fully automated pipeline for creating and processing Quantitative Susceptibility Maps (QSM), extracting QSM…☆25Dec 11, 2023Updated 2 years ago
- R package for reading and writing neuroimaging file formats. Not limited to FreeSurfer formats anymore, despite its name.☆23Sep 30, 2026Updated last week
- CNN-based segmentation tool for segmenting PVS on T1 and WMH on FLAIR MRI☆19Feb 10, 2026Updated 8 months ago
- Managed Database hosting by DigitalOcean • AdPostgreSQL, MySQL, MongoDB, Kafka, Valkey, and OpenSearch available. Automatically scale up storage and focus on building your apps.
- Scripts for SPM, FSL and AFNI used for investigating the validity of parametric statistics for multi-subject fMRI.☆27May 22, 2018Updated 8 years ago
- Implementation of various label fusion approaches for medical imaging.☆14May 29, 2025Updated last year
- BOLD-CSF coupling☆25Feb 23, 2024Updated 2 years ago
- A MATLAB toolbox for performing along-tract analysis of diffusion tensor imaging (DTI) MRI tractography data.☆48Mar 30, 2013Updated 13 years ago
- A toolkit to generate MR sequence diagrams☆15Mar 16, 2023Updated 3 years ago
- GPU accelerated source code for motion compensation of multi-stack MRI data☆65Jan 7, 2020Updated 6 years ago
- NeMo brain tractograms tool☆12Dec 14, 2020Updated 5 years ago
- RSANet: Recurrent Slice-wise Attention Network for Multiple Sclerosis Lesion Segmentation (MICCAI 2019)☆26Feb 4, 2020Updated 6 years ago
- RDS message logger using a silicon labs si470x chip connected to a raspberry pi☆11Apr 18, 2015Updated 11 years ago
- Deploy on Railway without the complexity - Free Credits Offer • AdConnect your repo and Railway handles the rest with instant previews. Quickly provision container image services, databases, and storage volumes.
- The unholy union of three.js and Mikola Lysenko's ndarrays.☆15Jan 22, 2022Updated 4 years ago
- Correcting Covariance Batch Effects (CovBat): Harmonization of mean and covariance for multi-site data☆27Mar 13, 2023Updated 3 years ago
- BROCCOLI: Software for Fast fMRI Analysis on Many-Core CPUs and GPUs☆118Oct 16, 2020Updated 5 years ago
- VB17 Sequence Protocols. A collection of pdfs of sequence protocols that where used in my publications. Mostly VASO, Multi-echo, SMS, 3D-…☆20Oct 3, 2026Updated last week
- A Foundational Keypoint Model for Robust and Flexible Brain MRI Registration☆59Jul 24, 2025Updated last year
- This is a SPM12 batch script that runs a standard fMRI preprocessing pipeline on a BIDS formatted data-set.☆13Nov 19, 2020Updated 5 years ago
- A simple shell script that works in conjunction with iptables to help you fighting DDoS attacks☆17Nov 2, 2016Updated 9 years ago