BIC-MNI / BEaST
C implementation of Brain Extraction based on nonlocal Segmentation Technique
☆16Updated 3 years ago
Alternatives and similar repositories for BEaST:
Users that are interested in BEaST are comparing it to the libraries listed below
- ☆27Updated 3 years ago
- A single NIfTI image saved with all 48 spatial rotation permutations☆28Updated 3 years ago
- TF2.3 DCE-/DSC-MRI processing code, collected, tested and made available to all.☆36Updated 2 weeks ago
- perivascular space segmentation☆14Updated 2 years ago
- Automated deep-learning based brain extraction applicable to a broad range of MRI sequence types and with robust performance even in the …☆34Updated 3 years ago
- Multi-site dMRI harmonization☆47Updated 2 months ago
- The Sherbrooke Connectivity Imaging Lab (SCIL) Python dMRI processing toolbox☆65Updated 3 weeks ago
- Multi Atlas Segmentation and Morphometric analysis toolkit (MASMAT) for mouse brain MRI☆36Updated 5 months ago
- Pipeline for Analysing Lesions after Stroke (PALS) is a scalable and user-friendly toolbox designed to facilitate standardised analysis a…☆23Updated 3 months ago
- Simulate realistic diffusion-weighted MR data☆19Updated 2 years ago
- CNN based brain masking☆15Updated this week
- Clinical Toolbox for SPM (https://www.nitrc.org/projects/clinicaltbx/)☆45Updated 3 years ago
- MIRTK based SVR reconstruction☆50Updated 4 months ago
- CNN-based segmentation tool for segmenting PVS on T1 and WMH on FLAIR MRI☆12Updated 9 months ago
- Python module for processing dynamic contrast enhanced magnetic resonance imaging (DCE-MRI) data☆28Updated 2 years ago
- Segmentation of Choroid Plexus using Gaussian Mixture Model☆13Updated 2 years ago
- Super-resolution of multimodal clinical magnetic resonance images (MRIs)☆15Updated 2 years ago
- An automated pipeline for integrated preprocessing and quality assurance of diffusion weighted MRI images☆47Updated 7 months ago
- A MATLAB toolbox for performing along-tract analysis of diffusion tensor imaging (DTI) MRI tractography data.☆43Updated 11 years ago
- Code and model of article "End-to-end learning of brain tissue segmentation from imperfect labeling" https://arxiv.org/abs/1612.00940☆16Updated 6 years ago
- Brain CT image segmentation, normalisation, skull-stripping and total brain/intracranial volume computation.☆70Updated 7 months ago
- A project to provide custom sorting and renaming of dicom files☆77Updated 8 months ago
- DL+DiReCT - Direct Cortical Thickness Estimation using Deep Learning-based Anatomy Segmentation and Cortex Parcellation☆26Updated 4 months ago
- Dynamic Contrast Enhanced (DCE) MRI Analysis Software☆50Updated 2 months ago
- ExploreASL: releases can be found in the main branch or within the releases tab. If you want to contribute, please contact us at h.j.muts…☆51Updated this week
- Diffusion parameter EStImation with Gibbs and NoisE Removal pipeline Version 2☆20Updated this week
- Convert tractography studies from mrtrix into dicom for use in navigation software☆15Updated last week
- Diffusion parameter EStImation with Gibbs and NoisE Removal pipeline☆51Updated last year
- Automated Fiber Quantification☆77Updated last year
- Region- and voxel-based probabilistic mapping of whole-brain veins and arteries (densities and diameter) in the MNI space☆49Updated 2 years ago