Mouse-Imaging-Centre / RMINCView external linksLinks
Statistics for MINC volumes: A library to integrate voxel-based statistics for MINC volumes into the R environment. Supports getting and writing of MINC volumes, running voxel-wise linear models, correlations, etc.; correcting for multiple comparisons using the False Discovery Rate, and more. With contributions from Jason Lerch, Chris Hammill, J…
☆25Dec 12, 2025Updated 2 months ago
Alternatives and similar repositories for RMINC
Users that are interested in RMINC are comparing it to the libraries listed below
Sorting:
- Python code for flexible pipeline control☆27Sep 29, 2022Updated 3 years ago
- Version 2 of the minc-toolkit, uses tools based on ITK version 4.x☆53May 27, 2025Updated 8 months ago
- FiberNavigator - Maxime Chamberland -☆10Feb 9, 2022Updated 4 years ago
- fMRI preprocessing pipeline and analysis tools adapted for rodent images. Visit the full documentation at https://rabies.readthedocs.io/☆50Updated this week
- A python interface to the MINC 2 library, allowing use of numpy arrays to access MINC data, and other such similar goodies, developed by …☆14Sep 26, 2022Updated 3 years ago
- nf-neuro is a nextflow neuroimaging library maintained by the SCIL team☆19Updated this week
- LaTex code for creating my CV☆11Jul 5, 2019Updated 6 years ago
- NeuroElf (MATLAB)☆18Jan 19, 2025Updated last year
- Jupyter notebooks for analyzing diffusion MRI data in order to calculate DTI, DKI, NODDI, SS3T-CSD, and MSMT-CSD modelled parametric maps☆14Sep 8, 2023Updated 2 years ago
- agent-based S-I-R model for neurodegeneration☆21Mar 1, 2022Updated 3 years ago
- BIDS Application for the Configurable Pipeline for the Analysis of Connectomes (C-PAC)☆14Dec 15, 2025Updated last month
- SwE toolbox☆16Jun 14, 2021Updated 4 years ago
- ☆18Feb 6, 2026Updated last week
- Deep Learning tools for medical image and biomarker analysis☆19Jan 11, 2023Updated 3 years ago
- Algorithmic framework for measuring feature importance, outlier detection, model applicability evaluation, and ensemble predictive modeli…☆18Aug 21, 2025Updated 5 months ago
- libminc is the core library and API of the MINC toolkit☆19Updated this week
- Functional Analysis with Random Forests☆20Dec 19, 2023Updated 2 years ago
- a collection of additional caches and helper functions to work alongside the memoise package☆23Oct 8, 2018Updated 7 years ago
- OBSOLETE: Medical Image NetCDF, this package is now split into two parts: libminc ( https://github.com/BIC-MNI/libminc ) and minc-tools (…☆36Nov 2, 2016Updated 9 years ago
- Tool for downloading ABCD_BIDS inputs and derivatives from the ABCD-BIDS NDA Collection 3165.☆24Aug 13, 2024Updated last year
- An ansible playbook to deploy a complete standalone neuroimaging workstation☆26Oct 27, 2025Updated 3 months ago
- GNU R package for reading and writing neuroimaging file formats. Not limited to FreeSurfer anymore, despite its name.☆23Sep 9, 2025Updated 5 months ago
- Exercises for 2015 Berkeley practical neuroimaging class☆26Nov 17, 2015Updated 10 years ago
- R-package providing mesh manipulation routines from VCGLIB☆25Oct 30, 2024Updated last year
- Generate subject connectomes from raw BIDS data & perform inter-subject connection density normalisation, using the MRtrix3 software pac…☆54Jan 6, 2026Updated last month
- A package for various computations with simplicial complexes, combinatorial codes, directed complexes and their filtrations.☆28Jan 11, 2023Updated 3 years ago
- NiiStat is a set of Matlab scripts for analyzing neuroimaging data from clinical populations☆32Jul 27, 2020Updated 5 years ago
- CIVET Installer☆30Jan 29, 2022Updated 4 years ago
- Jupyter Notebook that illustrates how to query, package, and download data from NIMH Data Archive☆33Mar 31, 2021Updated 4 years ago
- Basic minc-tools from former minc repository☆33Nov 28, 2024Updated last year
- The containers can be used in combination with our transparent singularity or neurocommand tool, that wrap the executables inside a conta…☆35Feb 5, 2026Updated last week
- ☆211Jun 23, 2023Updated 2 years ago
- Global Ecosystem Dynamics Investigation (GEDI) L2A/L2B -> GeoParquet & GeoDataFrame/Xarray☆10Jan 21, 2026Updated 3 weeks ago
- Compress PIT tag capture histories for use in various analyses☆10Dec 16, 2025Updated last month
- Data and code for Emotion Prediction Errors☆10Feb 22, 2022Updated 3 years ago
- Lightweight framework for neuroimaging-clinical data organization/processing☆37Feb 6, 2026Updated last week
- ☝🏼👉🏼👇🏼👈🏼 Dependency-free purrr-like apply/map/iterate functions☆50Jun 28, 2019Updated 6 years ago
- Compare a statistical map of a brain with gene expression patterns from Allen Human Brain Atlas.☆33Sep 7, 2018Updated 7 years ago
- Code to evaluate nonlinear Granger causality using the kernel trick to reduce complexity☆35Mar 24, 2023Updated 2 years ago