Metaproject uniting all the available minc tools
☆40Aug 9, 2023Updated 2 years ago
Alternatives and similar repositories for minc-toolkit
Users that are interested in minc-toolkit are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- PyTorch Implementation of Small Lesion Segmentation in Brain MRIs with Subpixel Embedding (ORAL, MICCAIW 2021)☆22Jul 1, 2022Updated 3 years ago
- Python scripts for shape analysis of neuroimaging data (wrapping around shapeDNA and FreeSurfer)☆21Feb 3, 2021Updated 5 years ago
- A call for contributions to the report of the FAIR Data Expert Group☆16Aug 30, 2017Updated 8 years ago
- R interface to the ANTs biomedical image processing library☆139Mar 10, 2026Updated 2 weeks ago
- cupy-accelerated DIPY☆12Mar 16, 2021Updated 5 years ago
- NordVPN Special Discount Offer • AdSave on top-rated NordVPN 1 or 2-year plans with secure browsing, privacy protection, and support for for all major platforms.
- NiiStat is a set of Matlab scripts for analyzing neuroimaging data from clinical populations☆33Jul 27, 2020Updated 5 years ago
- phylogenetic networks using ggplot2 and ggtree☆11Oct 22, 2025Updated 5 months ago
- Tools for spatial and temporal autocorrelation☆13Mar 12, 2022Updated 4 years ago
- Spring 2021 Short Course materials☆12Dec 2, 2024Updated last year
- Repo for the SimpleITK tutorial at MICCAI 2011☆28Nov 1, 2022Updated 3 years ago
- ☆12Apr 21, 2021Updated 4 years ago
- Code for NeuroImage: Clinical paper "Automatic post-stroke lesion segmentation on MR images using 3D residual convolutional neural networ…☆34Jun 9, 2020Updated 5 years ago
- Workshop materials for making your first R package 📦👩💻☆11Oct 11, 2022Updated 3 years ago
- bits of software for manipulating and analysing brain images in the nifti format☆14Aug 25, 2022Updated 3 years ago
- Managed hosting for WordPress and PHP on Cloudways • AdManaged hosting with the flexibility to host WordPress, Magento, Laravel, or PHP apps, on multiple cloud providers. Cloudways by DigitalOcean.
- Official implementation of Instance-wise and Center-of-Instance (ICI) segmentation loss☆12Oct 6, 2023Updated 2 years ago
- un nnUnet on Windows☆13Feb 27, 2024Updated 2 years ago
- QTL mapping for Diversity Outbred mice (and other multi-founder advanced intercrosses)☆14Apr 3, 2024Updated last year
- Example Application for Slicer Customization - Generated from KitwareMedical/SlicerCustomAppTemplate☆15Mar 9, 2023Updated 3 years ago
- ☆12Sep 7, 2023Updated 2 years ago
- Single cell Type Enrichment Analysis for Phenotypes (STEAP)☆14Jun 16, 2021Updated 4 years ago
- ITKGrowCut is a remote module for ITK. It segments a 3D image from user-provided foreground and background seeds.☆15Nov 15, 2025Updated 4 months ago
- Bagit-based data packaging specification for dissemination of research data with useful human and machine readable metadata: "Make Data C…☆38May 17, 2019Updated 6 years ago
- Script that registers Histology slices to volumetric image data☆11Oct 4, 2023Updated 2 years ago
- End-to-end encrypted cloud storage - Proton Drive • AdSpecial offer: 40% Off Yearly / 80% Off First Month. Protect your most important files, photos, and documents from prying eyes.
- Code for creating recurrent neural network with rotational dynamics. Model is discussed in detail in "Rotational Dynamics Reduce Interfer…☆17Jul 23, 2020Updated 5 years ago
- 3D Slicer extension to create tube or closed surface model from markup fiducials☆15Aug 27, 2023Updated 2 years ago
- Automatically fetch PDFs from terminal using a pubmed ID or search term (pubmed style)☆23Oct 3, 2009Updated 16 years ago
- A Python package to read/write/query/validate BIDS datasets.☆11Oct 21, 2025Updated 5 months ago
- ☆34Mar 5, 2026Updated 3 weeks ago
- A web platform for analyzing neuroimaging data.☆14Oct 17, 2023Updated 2 years ago
- Utility extension for 3D Slicer, containing tools and algorithms for building image guided surgery applications☆17Mar 17, 2026Updated last week
- ISLES 2015 (ISCHEMIC STROKE LESION SEGMENTATION)☆12Jan 4, 2026Updated 2 months ago
- Book of 3D Slicer.☆12Feb 12, 2018Updated 8 years ago
- Managed Kubernetes at scale on DigitalOcean • AdDigitalOcean Kubernetes includes the control plane, bandwidth allowance, container registry, automatic updates, and more for free.
- The Brain Predictability toolbox (BPt), is a python based Machine Learning library designed primarily for tabular and neuroimaging specif…☆11Dec 14, 2022Updated 3 years ago
- Reconstruction and image processing of micro-CT/nano-CT data taken at SPring-8 and APS Argonne.☆15Feb 6, 2026Updated last month
- ☆13Dec 3, 2020Updated 5 years ago
- ISLES22 Acute Ischemic Stroke segmentation competition, team SEALS final submission☆12Nov 3, 2023Updated 2 years ago
- FreeCodeCamp - Scientific Computing with Python Projects - Time Calculator Challenge #2☆13Oct 5, 2022Updated 3 years ago
- Tools for spatial and temporal autocorrelation☆27Apr 24, 2023Updated 2 years ago
- These protocols are for the analysis of subcortical volume, and cortical thickness and surface area data within FreeSurfer ROI's for ENIG…☆23Mar 3, 2026Updated 3 weeks ago