INCF / neuroscience-data-structureLinks
Space for discussion of a standardized structure (directory layout + metadata) for experimental data in systems neuroscience, similar to the idea of BIDS in neuroimaging
☆22Updated 2 years ago
Alternatives and similar repositories for neuroscience-data-structure
Users that are interested in neuroscience-data-structure are comparing it to the libraries listed below
Sorting:
- Lightweight data specification for systems neuroscience, inspired by BIDS.☆19Updated last week
- Create NWB files by converting and combining neural data in proprietary formats and adding essential metadata.☆64Updated this week
- Browser-based NWB visualization and DANDI exploration☆60Updated this week
- NWB Explorer is a web application to visualise and analyse the content of NWB:N 2 files☆25Updated last month
- A MATLAB toolbox for running behavioral neuroscience experiments and managing data☆32Updated last year
- Interactive Python course for using the Neurodata Without Borders format☆15Updated 6 years ago
- Explore the hierarchical structure of NWB 2.0 files and visualize data with Jupyter widgets.☆50Updated 2 weeks ago
- Web app for viewing results of ephys spike sorting☆26Updated last month
- Create NWB files by converting and combining neural data in proprietary formats and adding essential metadata.☆25Updated 2 years ago
- Neuroscience data analysis framework for reproducible research built by Loren Frank Lab at UCSF☆103Updated this week
- A open toolbox of several machine learning approaches for sharp-wave ripple detection☆30Updated last year
- Tools for analyzing spiking data from single-neuron recodings.☆29Updated last month
- Multichannel time series lossless compression in pure Python based on NumPy and zlib☆40Updated 6 months ago
- IBL core shared libraries☆63Updated this week
- Rendering anatomical heatmaps with brainrender and matplotlib☆44Updated 2 weeks ago
- Snakemake + BIDS☆19Updated last month
- Open Neurophysiology Environment☆21Updated this week
- Visualization of electrophysiological data from Elephant☆24Updated 11 months ago
- Functions to assess quality of spike sorting results☆34Updated 2 years ago
- Code for Functional Mixed Models for Fiber Photometry☆13Updated 2 months ago
- Collection of probe description for probeinterface☆16Updated this week
- ☆52Updated last year
- Open resource exchange platform for non-human primate neuroimaging☆22Updated 2 weeks ago
- Collection of tools to handle Neuropixel 1.0 and 2.0 data☆17Updated last week
- Data format specification schema for the NWB neurophysiology data format☆60Updated this week
- Metrics for spike sorting validation/quality control☆14Updated 4 years ago
- Modern Neuroimaging Made Simple☆21Updated this week
- Histology processing☆70Updated 3 weeks ago
- ☆10Updated 2 years ago
- A package to manage electrophysiology analysis.☆23Updated last week