schultzlab / Neural_ManifoldsLinks
A repository of neural manifold techniques described and compared in "Neural manifold analysis of brain circuit dynamics in health and disease"
☆29Updated 2 years ago
Alternatives and similar repositories for Neural_Manifolds
Users that are interested in Neural_Manifolds are comparing it to the libraries listed below
Sorting:
- Code to train and analyze multi-region data-constrained RNNs and perform Current-Based Decomposition (CURBD)☆54Updated 4 years ago
- Neuroscience data analysis framework for reproducible research built by Loren Frank Lab at UCSF☆103Updated this week
- Open-source, graph-based Python code generator and analysis toolbox for dynamical systems (pre-implemented and custom models). Most pre-i…☆84Updated last month
- NEural MOdelS, a statistical modeling framework for neuroscience.☆106Updated this week
- Library to perform Slice Tensor Component Analysis (sliceTCA)☆54Updated 7 months ago
- pynapple collaborative data analysis (high level python scripts)☆37Updated last year
- State space models for decoding hippocampal trajectories and determining their type using sorted or clusterless data☆50Updated 2 weeks ago
- Ephys toolbox to match single units (electrophysiology) either within the same day (over splits) or across two days☆68Updated 2 weeks ago
- A dimensionality reduction framework for disentangling the flow of signals between populations of neurons☆33Updated last month
- ☆59Updated 3 years ago
- Neuroelectrophysiology object model and data analysis in Python.☆50Updated 2 months ago
- Package for the data-driven representation of non-linear dynamics over manifolds based on a statistical distribution of local phase portr…☆87Updated 2 months ago
- Machine Learning Methods for Neural Data Analysis☆19Updated 4 months ago
- Code for "Cortical areas interact through a communication subspace", Semedo et al. (Neuron, 2019)☆47Updated 6 years ago
- Create NWB files by converting and combining neural data in proprietary formats and adding essential metadata.☆64Updated last week
- OpenScope databook: a collaborative, versioned, data-centric collection of foundational analyses for reproducible systems neuroscience 🐁…☆73Updated 2 months ago
- Code accompanying Steinmetz et al., 2019☆60Updated 4 years ago
- NeuroPyxels (npyx) is a python library built for electrophysiologists using Neuropixels electrodes. This package stems from the need of a…☆134Updated 3 months ago
- IBL core shared libraries☆63Updated last week
- MountainLab is data processing, sharing and visualization software for scientists. It is built around MountainSort, spike sorting softwar…☆44Updated 6 years ago
- Code implements the LN model used to describe spike trains of MEC neurons based on the animal's position, head direction, speed, and thet…☆23Updated 3 years ago
- A open toolbox of several machine learning approaches for sharp-wave ripple detection☆30Updated last year
- Tutorial☆11Updated 4 years ago
- Python-based tools for pre-, post-processing, validating, and curating spike sorting datasets.☆50Updated 3 years ago
- jPCA for Neural Data Analysis in Python☆50Updated 2 years ago
- Tutorials for using SpikeInterface on extracellular datasets.☆66Updated last year
- WIP: Python port of Kilosort2☆50Updated 2 years ago
- Preferential Subspace Identification Algorithm☆54Updated 4 months ago
- Tools for analyzing spiking data from single-neuron recodings.☆29Updated last month
- Tools for identifying sharp wave ripple events using LFPs☆39Updated 11 months ago