schultzlab / Neural_Manifolds
A repository of neural manifold techniques described and compared in "Neural manifold analysis of brain circuit dynamics in health and disease"
☆25Updated last year
Alternatives and similar repositories for Neural_Manifolds:
Users that are interested in Neural_Manifolds are comparing it to the libraries listed below
- pynapple collaborative data analysis (high level python scripts)☆37Updated last year
- Library to perform Slice Tensor Component Analysis (sliceTCA)☆51Updated last month
- A dimensionality reduction framework for disentangling the flow of signals between populations of neurons☆31Updated this week
- Code to train and analyze multi-region data-constrained RNNs and perform Current-Based Decomposition (CURBD)☆53Updated 4 years ago
- DataHigh: A graphical user interface for visualizing and interacting with high-dimensional neural activity☆17Updated 6 years ago
- Code for "Cortical areas interact through a communication subspace", Semedo et al. (Neuron, 2019)☆46Updated 5 years ago
- WIP: Python port of Kilosort2☆50Updated last year
- IBL core shared libraries☆63Updated this week
- State space models for decoding hippocampal trajectories and determining their type using sorted or clusterless data☆49Updated 7 months ago
- Code implements the LN model used to describe spike trains of MEC neurons based on the animal's position, head direction, speed, and thet…☆23Updated 2 years ago
- Code accompanying Steinmetz et al., 2019☆59Updated 3 years ago
- A very simple and barebones tensor decomposition library for CP decomposition a.k.a. PARAFAC a.k.a. TCA☆35Updated last year
- ☆51Updated 2 years ago
- Machine Learning Methods for Neural Data Analysis☆14Updated this week
- Tools for analyzing spiking data from single-neuron recodings.☆26Updated last month
- A open toolbox of several machine learning approaches for sharp-wave ripple detection☆28Updated 9 months ago
- A Matlab interface for reading and writing NWB files☆52Updated this week
- NEural MOdelS, a statistical modeling framework for neuroscience.☆95Updated this week
- Neuroelectrophysiology object model and data analysis in Python.☆51Updated last month
- A course given at the 2017 Canadian Neuroscience meeting, Neural Signal Analysis Satellite.☆14Updated 6 years ago
- Tools for identifying sharp wave ripple events using LFPs☆36Updated 6 months ago
- MountainLab is data processing, sharing and visualization software for scientists. It is built around MountainSort, spike sorting softwar…☆44Updated 6 years ago
- This reading list is centered around the practical application of linear dynamical systems models to predict neural data☆38Updated 3 years ago
- DataJoint pipeline for IBL project☆20Updated 2 years ago
- ☆23Updated 5 years ago
- Code for neural and behavioral data analysis from the Brain Computation and Behavior Lab, aka AyA Lab, at Cornell University.☆17Updated this week
- Neural Spike Train Analysis Toolbox for Matlab☆34Updated 7 years ago
- Ephys toolbox to match single units (electrophysiology) either within the same day (over splits) or across two days☆58Updated last week
- Neuroscience data analysis framework for reproducible research built by Loren Frank Lab at UCSF☆98Updated this week
- Neuropixels case for chronic recordings in freely moving mice.☆17Updated 5 years ago