☆14Jan 20, 2026Updated 9 months ago
Alternatives and similar repositories for ENGINE
Users that are interested in ENGINE are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- Domain-PFP is a self-supervised method to predict protein functions from the domains☆13Nov 1, 2023Updated 2 years ago
- ☆72Mar 18, 2026Updated 7 months ago
- ProtNote is a multimodal deep learning model that leverages free-form text to enable both supervised and zero-shot protein function predi…☆64Sep 14, 2026Updated last month
- Representation learning for protein functional site analysis☆17Aug 11, 2023Updated 3 years ago
- TUnA: Transformer-based Uncertainty Aware model for PPI Prediction☆18Dec 21, 2025Updated 10 months ago
- Deploy on Railway without the complexity - Free Credits Offer • AdConnect your repo and Railway handles the rest with instant previews. Quickly provision container image services, databases, and storage volumes.
- Benchmarking scripts for Gaia☆17Apr 10, 2025Updated last year
- ☆22Apr 20, 2025Updated last year
- Pooling by PageRank Token Importance. This is a weighted average pooling method where the weights are derived from the internal attention…☆19Jun 11, 2025Updated last year
- ☆14May 18, 2025Updated last year
- Metax: Accurate Cross-Domain Taxon Profiling via a Probabilistic Model of Genome Coverage☆35Oct 12, 2026Updated last week
- PLMSearch enables accurate and fast homologous protein search with only sequences as input☆83Sep 9, 2025Updated last year
- Bioinformatics Algorithms on Rosalind☆27Oct 9, 2019Updated 7 years ago
- Deep Learning at Scale Training Event at NERSC☆23Jun 5, 2025Updated last year
- ☆11Aug 29, 2025Updated last year
- Managed Kubernetes at scale on DigitalOcean • AdDigitalOcean Kubernetes includes the control plane, bandwidth allowance, container registry, automatic updates, and more for free.
- Functional ANnoTAtion based on embedding space SImilArity☆22Sep 26, 2026Updated 3 weeks ago
- FusionProt: Fusing Sequence and Structural Information for Unified Protein Representation Learning☆18Dec 13, 2025Updated 10 months ago
- 机器学习、深度学习初学者最适合的竞赛莫过于Kaggle，而国内环境下还没有流通的对于《The Kaggle Book：: Data analysis and machine learning for competitive data science》一书的翻译件。本仓库存储…☆20May 26, 2025Updated last year
- Protein representation and design under a single training scheme☆25May 17, 2026Updated 5 months ago
- ☆34Aug 27, 2025Updated last year
- ☆28Oct 21, 2022Updated 4 years ago
- Towards a protein binder candidate for every protein☆43Sep 1, 2026Updated last month
- Low memory inference for Boltz☆27Oct 7, 2026Updated 2 weeks ago
- High-performance Duo-V100-GPU inference for selected model checkpoints and GPUs.☆31Oct 14, 2026Updated last week
- Managed Database hosting by DigitalOcean • AdPostgreSQL, MySQL, MongoDB, Kafka, Valkey, and OpenSearch available. Automatically scale up storage and focus on building your apps.
- ☆23Mar 6, 2024Updated 2 years ago
- Code and model weights for PoET-2, a retrieval-augmented multimodel protein language model for protein sequence generation and representa…☆31Aug 20, 2025Updated last year
- PLM-interact: extending protein language models to predict protein-protein interactions.☆74Aug 29, 2025Updated last year
- AdaptiveFlow for Virtual Screening (AFVS)☆19Jul 19, 2026Updated 3 months ago
- A unified framework for making structural biology tools interoperable.☆117Updated this week
- Eukaryote Genome Annotation☆27Oct 14, 2026Updated last week
- A curated, interactive directory of protein design research groups worldwide.☆20Sep 19, 2026Updated last month
- SpatialPPIv2: Enhancing protein–protein interaction prediction through graph neural networks with protein language models.☆28Jan 8, 2026Updated 9 months ago
- A deep learning-based predictor of enzyme optimal pH☆13Jun 25, 2025Updated last year
- End-to-end encrypted cloud storage - Proton Drive • AdSpecial offer: 40% Off Yearly / 80% Off First Month. Protect your most important files, photos, and documents from prying eyes.
- ☆12May 13, 2025Updated last year
- Speedrunning PLM pretraining☆14Sep 22, 2026Updated last month
- ☆29May 26, 2026Updated 4 months ago
- LatentDE: Latent-based Directed Evolution for Protein Sequence Design☆39Apr 2, 2025Updated last year
- ☆10Nov 14, 2024Updated last year
- ☆25Oct 2, 2026Updated 3 weeks ago
- Embeddings for ontologies in the Description Logic EL++☆28Feb 2, 2023Updated 3 years ago