🌲 a flexible gene expression simulator with codon-specific translation rates
☆13Jul 21, 2025Updated last year
Alternatives and similar repositories for pinetree
Users that are interested in pinetree are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- Webserver and command line tool for annotating engineered plasmids☆17May 19, 2026Updated 4 months ago
- Analyzes whole genome sequencing data for gene-editing verification☆13Aug 31, 2026Updated 3 weeks ago
- Genomics resources for the Long-Term Evolution Experiment with E. coli☆20Jul 11, 2026Updated 2 months ago
- Calling R from Go and a better cli for the R console (WIP, nothing is working now)☆14Aug 19, 2020Updated 6 years ago
- Time-resolved metagenomic sequencing of Lenski's long-term evolution experiment with Escherichia coli☆27Mar 11, 2019Updated 7 years ago
- Managed hosting for WordPress and PHP on Cloudways • AdManaged hosting for WordPress, Magento, Laravel, or PHP apps, on multiple cloud providers. Deploy in minutes on Cloudways by DigitalOcean.
- Code associated with: AutoStepfinder: A fast and automated step detection method for single-molecule analysis Luuk Loeff, Jacob W J Kerss…☆13Jun 12, 2024Updated 2 years ago
- An interactive web application tool that enables big data visualization of the 136k+ UK Road Accidents reported during 2016.☆10Oct 19, 2022Updated 3 years ago
- An Alternative Implementation of Entropy Balancing Weights For Estimating Causal Effects☆11Jul 28, 2021Updated 5 years ago
- Termie is a Python script that uses the OpenAI API to generate and execute shell commands based on user input.☆16Aug 10, 2023Updated 3 years ago
- The MorphoCut image processing pipeline library☆13Aug 11, 2025Updated last year
- ☆15Mar 4, 2019Updated 7 years ago
- ☆12May 6, 2021Updated 5 years ago
- Common molecule fragments for visualization in Avogadro☆17Apr 1, 2026Updated 5 months ago
- Files for the Genome Design/Genome Analytics Short-course organized by the SBRG☆10Nov 30, 2021Updated 4 years ago
- Managed hosting for WordPress and PHP on Cloudways • AdManaged hosting for WordPress, Magento, Laravel, or PHP apps, on multiple cloud providers. Deploy in minutes on Cloudways by DigitalOcean.
- All design files and scripts necessary for the construction and use of the optoPlate-96☆11Apr 28, 2022Updated 4 years ago
- The Databionic swarm is an unsupervised machine learning method for cluster analysis and the visualization of structures of high-dimensio…☆12May 15, 2024Updated 2 years ago
- MultiSKAT is an R-package focused at rare-variant analysis of continuous multiple phenotype data. This project contains the R-codes/funct…☆13Jun 11, 2019Updated 7 years ago
- A terribly-simple data base for time series☆14Mar 25, 2026Updated 6 months ago
- R package with Classes and Methods for Fast Memory-Efficient Boolean Selections☆13May 6, 2025Updated last year
- Visual Molecular Dynamics in Docker Container☆12Jan 1, 2015Updated 11 years ago
- This repository contains FAQs (Frequently Asked Questions) for genome in a bottle project☆10Sep 28, 2018Updated 7 years ago
- A modular compiler for biological chemical reaction networks☆54Updated this week
- Golang library for both compressing and decompressing data in the PKWare Data Compression Library (DCL) compressed format, otherwise know…☆19Aug 8, 2021Updated 5 years ago
- Deploy on Railway without the complexity - Free Credits Offer • AdConnect your repo and Railway handles the rest with instant previews. Quickly provision container image services, databases, and storage volumes.
- Computational framework to identify promoter sequences from RNA-seq datasets☆11Sep 27, 2023Updated 3 years ago
- ☆13Sep 7, 2026Updated 2 weeks ago
- General low-level API☆51Jul 18, 2022Updated 4 years ago
- Subplex Optimization Algorithm☆11Mar 23, 2026Updated 6 months ago
- R package providing date C++ library header files☆12Jul 28, 2026Updated last month
- Temporal Pathway Synthesizer☆17Jun 28, 2024Updated 2 years ago
- ☆13Nov 13, 2018Updated 7 years ago
- This site provides information on conducting reproducible science using the R language.☆13Nov 2, 2016Updated 9 years ago
- beRi "beri environments for R installations" is an R environment, R installation, and R package management system for R☆14Dec 23, 2025Updated 9 months ago
- AI Agents on DigitalOcean Gradient AI Platform • AdBuild production-ready AI agents using customizable tools or access multiple LLMs through a single endpoint. Create custom knowledge bases or connect external data.
- Empowering everyone to create reliable and safety AI coding agent.☆12Sep 2, 2024Updated 2 years ago
- Roboliq - software for controlling liquid handling robots☆11Jun 19, 2018Updated 8 years ago
- SwRI mobile manipulation platform☆13Jun 8, 2018Updated 8 years ago
- Constraint-based Metabolic Modeling Course☆12Jul 25, 2022Updated 4 years ago
- bioscrape (Bio-circuit Stochastic Single-cell Reaction Analysis and Parameter Estimation)☆16Jan 9, 2021Updated 5 years ago
- C++ implementation of SBOL 2.3.2☆17Oct 13, 2020Updated 5 years ago
- Standalone Custom Transfer Agent for Git LFS☆13Sep 13, 2018Updated 8 years ago