π² a flexible gene expression simulator with codon-specific translation rates
β13Jul 21, 2025Updated last year
Alternatives and similar repositories for pinetree
Users that are interested in pinetree are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- Webserver and command line tool for annotating engineered plasmidsβ17May 19, 2026Updated 2 months ago
- Analyzes whole genome sequencing data for gene-editing verificationβ13Jul 3, 2026Updated 3 weeks ago
- Genomics resources for the Long-Term Evolution Experiment with E. coliβ20Jul 11, 2026Updated 2 weeks ago
- Calling R from Go and a better cli for the R console (WIP, nothing is working now)β13Aug 19, 2020Updated 5 years ago
- Time-resolved metagenomic sequencing of Lenski's long-term evolution experiment with Escherichia coliβ26Mar 11, 2019Updated 7 years ago
- Deploy to Railway using AI coding agents - Free Credits Offer β’ AdUse Claude Code, Codex, OpenCode, and more. Autonomous software development now has the infrastructure to match with Railway.
- Code associated with: AutoStepfinder: A fast and automated step detection method for single-molecule analysis Luuk Loeff, Jacob W J Kerssβ¦β12Jun 12, 2024Updated 2 years ago
- An interactive web application tool that enables big data visualization of the 136k+ UK Road Accidents reported during 2016.β10Oct 19, 2022Updated 3 years ago
- An Alternative Implementation of Entropy Balancing Weights For Estimating Causal Effectsβ11Jul 28, 2021Updated 5 years ago
- Termie is a Python script that uses the OpenAI API to generate and execute shell commands based on user input.β16Aug 10, 2023Updated 2 years ago
- The MorphoCut image processing pipeline libraryβ13Aug 11, 2025Updated 11 months ago
- β15Mar 4, 2019Updated 7 years ago
- β12May 6, 2021Updated 5 years ago
- Common molecule fragments for visualization in Avogadroβ17Apr 1, 2026Updated 3 months ago
- Files for the Genome Design/Genome Analytics Short-course organized by the SBRGβ10Nov 30, 2021Updated 4 years ago
- Managed hosting for WordPress and PHP on Cloudways β’ AdManaged hosting for WordPress, Magento, Laravel, or PHP apps, on multiple cloud providers. Deploy in minutes on Cloudways by DigitalOcean.
- All design files and scripts necessary for the construction and use of the optoPlate-96β11Apr 28, 2022Updated 4 years ago
- The Databionic swarm is an unsupervised machine learning method for cluster analysis and the visualization of structures of high-dimensioβ¦β12May 15, 2024Updated 2 years ago
- MultiSKAT is an R-package focused at rare-variant analysis of continuous multiple phenotype data. This project contains the R-codes/functβ¦β13Jun 11, 2019Updated 7 years ago
- A terribly-simple data base for time seriesβ14Mar 25, 2026Updated 4 months ago
- Constraint-based Metabolic Modeling Courseβ11Jul 25, 2022Updated 4 years ago
- R package with Classes and Methods for Fast Memory-Efficient Boolean Selectionsβ13May 6, 2025Updated last year
- Visual Molecular Dynamics in Docker Containerβ12Jan 1, 2015Updated 11 years ago
- This repository contains FAQs (Frequently Asked Questions) for genome in a bottle projectβ10Sep 28, 2018Updated 7 years ago
- A modular compiler for biological chemical reaction networksβ54Jul 19, 2026Updated last week
- Wordpress hosting with auto-scaling - Free Trial Offer β’ AdFully Managed hosting for WordPress and WooCommerce businesses that need reliable, auto-scalable performance. Cloudways SafeUpdates now available.
- Golang library for both compressing and decompressing data in the PKWare Data Compression Library (DCL) compressed format, otherwise knowβ¦β17Aug 8, 2021Updated 4 years ago
- Computational framework to identify promoter sequences from RNA-seq datasetsβ11Sep 27, 2023Updated 2 years ago
- β13Dec 17, 2024Updated last year
- General low-level APIβ50Jul 18, 2022Updated 4 years ago
- Subplex Optimization Algorithmβ11Mar 23, 2026Updated 4 months ago
- R package providing date C++ library header filesβ12Jan 14, 2026Updated 6 months ago
- Temporal Pathway Synthesizerβ17Jun 28, 2024Updated 2 years ago
- β13Nov 13, 2018Updated 7 years ago
- This site provides information on conducting reproducible science using the R language.β13Nov 2, 2016Updated 9 years ago
- Managed hosting for WordPress and PHP on Cloudways β’ AdManaged hosting for WordPress, Magento, Laravel, or PHP apps, on multiple cloud providers. Deploy in minutes on Cloudways by DigitalOcean.
- beRi "beri environments for R installations" is an R environment, R installation, and R package management system for Rβ14Dec 23, 2025Updated 7 months ago
- Empowering everyone to create reliable and safety AI coding agent.β12Sep 2, 2024Updated last year
- Roboliq - software for controlling liquid handling robotsβ11Jun 19, 2018Updated 8 years ago
- SwRI mobile manipulation platformβ12Jun 8, 2018Updated 8 years ago
- C++ implementation of SBOL 2.3.2β17Oct 13, 2020Updated 5 years ago
- bioscrape (Bio-circuit Stochastic Single-cell Reaction Analysis and Parameter Estimation)β16Jan 9, 2021Updated 5 years ago
- Standalone Custom Transfer Agent for Git LFSβ13Sep 13, 2018Updated 7 years ago