ddz16 / MoMuLinks
The PyTorch implementation of MoMu, described in "Natural Language-informed Modeling of Molecule Graphs".
☆28Updated 2 years ago
Alternatives and similar repositories for MoMu
Users that are interested in MoMu are comparing it to the libraries listed below
Sorting:
- [ICML 2024] Interaction-based Retrieval-augmented Diffusion Models for Protein-specific 3D Molecule Generation☆30Updated 10 months ago
- A Multi-modal Large Language Model for Molecular Science with Graph, Image, and Text☆30Updated last month
- ☆35Updated last year
- ☆24Updated 2 years ago
- [ICLR 2023] "Mole-BERT: Rethinking Pre-training Graph Neural Networks for Molecules"☆121Updated 2 years ago
- ☆50Updated last year
- Part of official implementation of "Natural language-informed learning of molecule graphs"☆18Updated 2 years ago
- ☆47Updated 2 years ago
- GeoSSL: Molecular Geometry Pretraining with SE(3)-Invariant Denoising Distance Matching, ICLR'23 (https://openreview.net/forum?id=CjTHVo1…☆46Updated last year
- Implementation of ICLR23 paper "Molecule Generation for Target Protein Binding with Structural Motifs"☆68Updated last year
- Code for AAAI24 paper Text-Guided Molecule Generation with Diffusion Language Model☆19Updated 3 weeks ago
- ☆13Updated 2 years ago
- [BIB 2023] Official implementation of "R2-DDI: Relation-aware Feature Refinement for Drug-drug Interaction Prediction".☆13Updated last year
- [ICLR 2024] Domain-Agnostic Molecular Generation with Chemical Feedback☆169Updated 7 months ago
- [ICLR 2024] Protein-Ligand Interaction Prior for Binding-aware 3D Molecule Diffusion Models☆46Updated 10 months ago
- [NeurIPS 24] Can LLMs Solve Molecule Puzzles? A Multimodal Benchmark for Molecular Structure Elucidation☆14Updated 4 months ago
- Code for "Unifying Molecular and Textual Representations via Multi-task Language Modelling" @ ICML 2023☆40Updated 10 months ago
- Llamole: Multimodal Large Language Models for Inverse Molecular Design with Retrosynthetic Planning☆28Updated 9 months ago
- Code for AAAI 2024 paper "PSC-CPI: Multi-Scale Protein Sequence-Structure Contrasting for Efficient and Generalizable Compound-Protein In…☆28Updated 5 months ago
- NeurIPS24: Aligning Target-Aware Molecule Diffusion Models with Exact Energy Optimization☆38Updated 3 months ago
- Repository for Text2Mol: Cross-Modal Molecular Retrieval with Natural Language Queries☆45Updated 3 months ago
- Implementation of GTMGC: Using Graph Transformer to Predict Molecule’s Ground-State Conformation (ICLR2024 Spotlight).☆17Updated last year
- The code for "Graph Diffusion Transformer for Multi-Conditional Molecular Generation"☆75Updated last month
- ☆46Updated last year
- This is the code of paper "De Novo Molecular Generation via Connection-aware Motif Mining". Zijie Geng, Shufang Xie, Yingce Xia, Lijun Wu…☆55Updated 6 months ago
- A Group Symmetric Stochastic Differential Equation Model for Molecule Multi-modal Pretraining, ICML'23☆33Updated last year
- [ICLR 2024] MARCEL: Machine Learning over Molecular Conformer Ensembles☆42Updated 2 years ago
- PyTorch code for KDD 2023 paper "Pre-training Antibody Language Models for Antigen-Specific Computational Antibody Design"☆52Updated last year
- Code for ICML 2024 paper "Learning to Predict Mutational Effects of Protein-Protein Interactions by Microenvironment-aware Hierarchical P…☆41Updated 9 months ago
- Official implementation for Learning Invariant Molecular Representation in Latent Discrete Space (NeurIPS 2023)☆21Updated last year