yejinjkim / drug-repurposing-graph
Code repository for "Prioritizing Repurposable Drugs for SARS-CoV-2 using Deep Learning and Population-based Validation"
☆15Updated 2 years ago
Alternatives and similar repositories for drug-repurposing-graph:
Users that are interested in drug-repurposing-graph are comparing it to the libraries listed below
- GraphCDR: A graph neural network method with contrastive learning for cancer drug response prediction☆26Updated 3 years ago
- ☆54Updated 5 years ago
- ☆66Updated last year
- PyTorch implementation of "TGSA: Protein-Protein Association-Based Twin Graph Neural Networks for Drug Response Prediction with Similarit…☆24Updated 3 years ago
- ☆10Updated 4 years ago
- Bi-Level Graph Neural Networks for Drug-Drug Interaction Prediction. ICML 2020 Graph Representation Learning and Beyond (GRL+) Workshop☆29Updated 4 years ago
- ☆19Updated 4 years ago
- ☆17Updated 3 years ago
- ☆33Updated 4 years ago
- Code to accompany the "Understanding the Performance of Knowledge Graph Embeddings in Drug Discovery" manuscript (Artificial Intelligence…☆33Updated 7 months ago
- ☆16Updated 3 years ago
- DPPIN: A Biological Repository of Dynamic Protein-Protein Interaction Network Data, IEEE BigData 2022☆29Updated 2 years ago
- Disease subnetwork detection with explainable Graph Neural Networks☆22Updated 10 months ago
- SkipGNN: Predicting Molecular Interactions with Skip-Graph Networks (Scientific Reports)☆64Updated 4 years ago
- A deep generative neural network based approach to impute drug response☆19Updated 3 years ago
- Drug-target interaction prediction using deepWalk node embedding algorithm on drugBank☆11Updated 4 years ago
- ☆48Updated 6 months ago
- ☆19Updated last year
- TIP: Tri-graph Interaction Propagation model for Polypharmacy Side Effect Prediction (GRL@NeurIPS, 2019)☆24Updated 2 years ago
- This repository provides an implementation of the DTiGEMSplus tool, a network-based method for computational Drug-Target Interaction pred…☆27Updated 3 years ago
- Contextual AI models for single-cell protein biology☆82Updated last month
- The official code implementation for DREAMwalk in Python.☆18Updated last year
- [Bioinformatics 2021] This is the repo for the paper `SumGNN: Multi-typed Drug Interaction Prediction via Efficient Knowledge Graph Summa…☆85Updated 8 months ago
- DeepDrug: A general graph-based deep learning framework for drug relation prediction☆59Updated 2 years ago
- ☆24Updated last year
- code for Gogleva et al manuscript☆45Updated 2 years ago
- Combinatorial prediction of therapeutic perturbations using causally-inspired neural networks☆23Updated 3 months ago
- Amino Acid Embedding Representation as Machine Learning Features☆19Updated 6 years ago
- The code for "Learning Molecular Representation in a Cell"☆24Updated 2 weeks ago
- A Python toolkit for setting up benchmarking dataset using biomedical networks☆22Updated last week