yejinjkim / drug-repurposing-graph
Code repository for "Prioritizing Repurposable Drugs for SARS-CoV-2 using Deep Learning and Population-based Validation"
☆15Updated 3 years ago
Alternatives and similar repositories for drug-repurposing-graph:
Users that are interested in drug-repurposing-graph are comparing it to the libraries listed below
- ☆56Updated 5 years ago
- GraphCDR: A graph neural network method with contrastive learning for cancer drug response prediction☆27Updated 3 years ago
- Drug-target interaction prediction using deepWalk node embedding algorithm on drugBank☆11Updated 4 years ago
- ☆19Updated 4 years ago
- DPPIN: A Biological Repository of Dynamic Protein-Protein Interaction Network Data, IEEE BigData 2022☆28Updated 2 years ago
- ☆33Updated 4 years ago
- SkipGNN: Predicting Molecular Interactions with Skip-Graph Networks (Scientific Reports)☆65Updated 4 years ago
- Code to accompany the "Understanding the Performance of Knowledge Graph Embeddings in Drug Discovery" manuscript (Artificial Intelligence…☆33Updated last week
- The official code implementation for DREAMwalk in Python.☆18Updated last year
- PyTorch implementation of "TGSA: Protein-Protein Association-Based Twin Graph Neural Networks for Drug Response Prediction with Similarit…☆24Updated 3 years ago
- This repository provides an implementation of the DTiGEMSplus tool, a network-based method for computational Drug-Target Interaction pred…☆27Updated 3 years ago
- [Bioinformatics 2021] This is the repo for the paper `SumGNN: Multi-typed Drug Interaction Prediction via Efficient Knowledge Graph Summa…☆85Updated 9 months ago
- ☆65Updated last year
- Codes and models for the paper "Learning Unknown from Correlations: Graph Neural Network for Inter-novel-protein Interaction Prediction".☆79Updated 3 years ago
- TIP: Tri-graph Interaction Propagation model for Polypharmacy Side Effect Prediction (GRL@NeurIPS, 2019)☆24Updated 2 years ago
- An end-to-end heterogeneous graph representation learning-based framework for drug-target interaction prediction☆30Updated 2 years ago
- Work on designing a graph co-attention algorithm.☆18Updated last year
- Deep Generative Models for Drug Combination (Graph Set) Generation given Hierarchical Disease Network Embedding☆30Updated 2 years ago
- Bi-Level Graph Neural Networks for Drug-Drug Interaction Prediction. ICML 2020 Graph Representation Learning and Beyond (GRL+) Workshop☆29Updated 4 years ago
- Orientation of the protein-protein interaction network using network diffusion techniques☆15Updated 4 years ago
- Synthetic lethality (SL) is a promising gold mine for the discovery of anti-cancer drug targets. KG4SL is the first graph neural network …☆33Updated last year
- Unsupervised neural network for learning embeddings of GO terms.☆16Updated 3 years ago
- ☆16Updated 3 years ago
- ☆19Updated last year
- A Python implementation of DTINet☆16Updated 2 years ago
- Code for reproducing results of "Unsupervised embeddings is all you need for protein function prediction"☆39Updated last year
- A deep generative neural network based approach to impute drug response☆20Updated 3 years ago
- ☆55Updated 4 years ago
- ☆63Updated 2 years ago
- Disease subnetwork detection with explainable Graph Neural Networks☆22Updated 11 months ago