☆16Sep 6, 2022Updated 3 years ago
Alternatives and similar repositories for structure_inducing_pre-training
Users that are interested in structure_inducing_pre-training are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- AnnapuRNA: a scoring function for predicting RNA-small molecule interactions.☆21Apr 5, 2024Updated 2 years ago
- A repository for neural representational learning of RNA secondary structures☆32Feb 13, 2020Updated 6 years ago
- GCN implementation for RNA-small molecule binding prediction. (https://academic.oup.com/nar/article/48/14/7690/5870337)☆16Nov 28, 2023Updated 2 years ago
- Documentation and code for predictive maintenance data and assess scripts.☆12Jun 8, 2023Updated 2 years ago
- Sample end-to-end pipeline over MIMIC-IV demonstrating the Event Stream GPT code base.☆17Jan 3, 2024Updated 2 years ago
- 1-Click AI Models by DigitalOcean Gradient • AdDeploy popular AI models on DigitalOcean Gradient GPU virtual machines with just a single click. Zero configuration with optimized deployments.
- Scalable Deep Learning for RNA Secondary Structure Prediction☆42Sep 23, 2025Updated 7 months ago
- Official implementation of Panacea: A foundation model for clinical trial design, recruitment, search, and summarization.☆18Dec 24, 2024Updated last year
- PyTorch extension for handling deeply nested sequences of variable length☆15Mar 19, 2026Updated last month
- contrastive learning and pre-trained encoder for protein-ligand binding sites prediction☆37Jul 4, 2025Updated 10 months ago
- to assess structural quality of RNA using 3D CNN☆14Aug 17, 2018Updated 7 years ago
- Dock Multiple Ligands with AutoDock Vina with one Command☆11Jan 10, 2018Updated 8 years ago
- Get prediction intervals, confidence intervals, and parameter uncertainties for various machine learning models☆19Feb 9, 2026Updated 2 months ago
- ☆10Jun 24, 2023Updated 2 years ago
- MTAE-based 5UTR design model☆10Jan 23, 2024Updated 2 years ago
- Managed Database hosting by DigitalOcean • AdPostgreSQL, MySQL, MongoDB, Kafka, Valkey, and OpenSearch available. Automatically scale up storage and focus on building your apps.
- Limited automatic tabular ML pipelines for generic MEDS datasets.☆18Apr 14, 2026Updated 2 weeks ago
- RNA Multiple Sequence Alignment☆51Jul 20, 2023Updated 2 years ago
- ☆13Oct 19, 2023Updated 2 years ago
- ☆10Jan 19, 2019Updated 7 years ago
- Source code and data files for "PEMT: A patent enrichment tool with applicability in drug discovery"☆16Jan 27, 2025Updated last year
- A collection of resources and information for concrete skills that are helpful when pursuing a PhD in computer science (specifically in M…☆23Apr 18, 2023Updated 3 years ago
- ☆10Jun 28, 2025Updated 10 months ago
- ☆15Feb 18, 2025Updated last year
- Geometry Deep Learning for Drug Discovery and Life Science☆72Apr 26, 2024Updated 2 years ago
- Wordpress hosting with auto-scaling - Free Trial Offer • AdFully Managed hosting for WordPress and WooCommerce businesses that need reliable, auto-scalable performance. Cloudways SafeUpdates now available.
- Predict binding affinity of ligand-protein complexes using Graph Neural Networks. The model is implemented using PyTorch Geometric and ba…☆11Nov 26, 2022Updated 3 years ago
- Curated structures submitted to the RNA-Puzzles experiment. Download as a zip file https://github.com/mmagnus/RNA-Puzzles-submission/arch…☆10Apr 6, 2023Updated 3 years ago
- DeepDrugDomain: A versatile Python toolkit for streamlined preprocessing and accurate prediction of drug-target interactions and binding …☆29Oct 22, 2024Updated last year
- A neural-symbolic joint reasoning approach for Natural Language Inference (NLI). Modeling NLI as inference path planning through a search…☆16Jun 9, 2021Updated 4 years ago
- Analysis and design of protein-protein or protein-peptide interactions based on atlas database.☆15Sep 27, 2022Updated 3 years ago
- From cryo-EM density map to atomic structure☆28Mar 31, 2026Updated last month
- ☆12Oct 21, 2018Updated 7 years ago
- The Vini in silico model of cancer☆12Mar 7, 2026Updated last month
- This is the pipeline of our new article "Enzyme Co-Scientist: Harnessing Large Language Models for Enzyme Kinetic Data Extraction from Li…☆17May 23, 2025Updated 11 months ago
- Managed Database hosting by DigitalOcean • AdPostgreSQL, MySQL, MongoDB, Kafka, Valkey, and OpenSearch available. Automatically scale up storage and focus on building your apps.
- Contrastive learning and pre-trained encoder (CLAPE) for protein-small molecules binding (SMB) sites prediction☆19Aug 22, 2024Updated last year
- This is the code for our paper Ligand Binding Prediction using Protein Structure Graphs and Residual Graph Attention Networks☆11Apr 29, 2022Updated 4 years ago
- Network representation learning on drug-target-side effects-indication graphs for side effect prediction☆13Feb 4, 2020Updated 6 years ago
- A domain knowledge interface for m6A genomics☆11May 13, 2019Updated 6 years ago
- Taiga for Dataset management☆12Updated this week
- Command-line tools for protein structure analysis: convert PDB, mmCIF, PDBML, or XYZR files into atomic sphere data, then compute volumes…☆15Apr 16, 2026Updated 2 weeks ago
- A Foundation Language Model For Multilayer Regulation of RNA☆22Nov 30, 2025Updated 5 months ago