wiwnopgm / boltz-finetuneLinks
Fine-tuning Boltz-1 for domain knowledge adaption
☆25Updated 4 months ago
Alternatives and similar repositories for boltz-finetune
Users that are interested in boltz-finetune are comparing it to the libraries listed below
Sorting:
- Enables using Boltz-1/1x to predict the structure of arbitrary covalent modifications / Non-Canonical Amino Acids. Covalent bonds are enf…☆16Updated 4 months ago
- Sidechain conditioning and modeling for full-atom protein sequence design☆118Updated 3 months ago
- Pytorch implementation for ICML 2024 paper Proteus: Exploring Protein Structure Generation for Enhanced Designability and Efficiency.☆81Updated last year
- A benchmark for 3D biomolecular structure prediction models☆66Updated 4 months ago
- This repository houses all the scripts and notebooks utilized for generating, analyzing, and validating the mdCATH dataset. Some user ex…☆46Updated 10 months ago
- ☆42Updated last year
- Multi-domain Distribution Learning for De Novo Drug Design☆115Updated 3 weeks ago
- Composing Unbalanced Flows for Flexible Docking and Relaxation (ICLR 2025)☆50Updated 3 months ago
- ☆93Updated 11 months ago
- ☆72Updated 3 months ago
- Pose checks for 3D Structure-based Drug Design methods☆91Updated 10 months ago
- Learning to design protein-protein interactions with enhanced generalization (ICLR 2024)☆47Updated 8 months ago
- Codebase of the paper "Str2Str: A Score-based Framework for Zero-shot Protein Conformation Sampling" (ICLR 2024)☆78Updated last year
- PINDER: The Protein INteraction Dataset and Evaluation Resource☆134Updated 10 months ago
- ☆78Updated last year
- Boltzmann-ranked alternative protein conformations from reduced-MSA AlphaFold2☆58Updated last month
- A Score-Only Adaptation of AlphaFold3 for Biomolecular Structure Evaluation☆71Updated last month
- MaSIF-neosurf: surface-based protein design for ternary complexes.☆146Updated last week
- A geometric flow matching model for generative protein-ligand docking and affinity prediction. (ISMB 2025)☆109Updated 3 weeks ago
- ☆25Updated 3 months ago
- Official repository of GENzyme☆53Updated 9 months ago
- All-atom protein generation using latent diffusion, with compositional function and taxonomic prompts. http://bit.ly/plaid-proteins☆112Updated 4 months ago
- Training and inference code for ShEPhERD: Diffusing shape, electrostatics, and pharmacophores for bioisosteric drug design [ICLR 2025 ora…☆77Updated 3 weeks ago
- Sequence-Structure-Surface Model for Protein Fitness Prediction (S3F)☆43Updated 9 months ago
- Generate intrinsically disordered peptide conformations via machine learning☆23Updated last year
- Flexible Protein-Protein Docking with a Multi-Track Iterative Transformer.☆98Updated last year
- Official repository for DiffPepBuilder and DiffPepDock tools☆100Updated this week
- ☆75Updated 7 months ago
- Diffusion model based protein-ligand flexible docking method☆113Updated 10 months ago
- mdml: Deep Learning for Molecular Simulations☆47Updated 4 months ago