soda-inria / causal_ehr_mimic
Code repository for the paper : Causal thinking for decision making on Electronic Health Records: why and how
☆16Updated last year
Alternatives and similar repositories for causal_ehr_mimic:
Users that are interested in causal_ehr_mimic are comparing it to the libraries listed below
- UniHPF : Universal Healthcare Predictive Framework with Zero Domain Knowledge☆13Updated last year
- Experiments applying FIDDLE on MIMIC-III and eICU. https://doi.org/10.1093/jamia/ocaa139☆24Updated 2 years ago
- Source code for a comprehensive analysis of MTL over EHR timeseries data.☆37Updated last year
- Sample end-to-end pipeline over MIMIC-IV demonstrating the Event Stream GPT code base.☆14Updated last year
- ☆33Updated last year
- ☆14Updated 7 months ago
- Taking off-the-shelf HuggingFace models and training them on EHR data☆15Updated 2 weeks ago
- DescEmb - Unifying Heterogenous Electronic Health Records Systems via Text-Based Code Embedding☆21Updated 11 months ago
- ☆31Updated last year
- [ICLR 2025] ACES: Automatic Cohort Extraction System for Event-Streams☆30Updated this week
- Repository for the paper 'MDS-ED: Multimodal Decision Support in the Emergency Department – a benchmark dataset based on MIMIC-IV'.☆14Updated this week
- Source codes of the paper "Hierarchical Pretraining on Multimodal Electronic Health Records".☆18Updated 11 months ago
- General Healthcare Predictive Framework☆15Updated last week
- [NeurIPS 2024 D&B] Official code for "EHRNoteQA: An LLM Benchmark for Real-World Clinical Practice Using Discharge Summaries"☆29Updated 2 months ago
- A simple set of MEDS polars-based ETL and transformation functions☆29Updated 2 weeks ago
- Repository for the HiRID ICU Benchmark (HiB) project☆52Updated last year
- Medical multi-modal learning with missing modality data (MLHC 2023)☆13Updated last year
- The MEDS Decentralized Extensible Validation (MEDS-DEV) Benchmark: Establishing Reproducibility and Comparability in ML for Health☆24Updated last week
- circEWS public code☆67Updated 4 months ago
- REMed: Retrieval-Enhanced Medical prediction model☆17Updated 2 months ago
- Dataset for Checking Consistency between Unstructured Notes and Structured Tables in Electronic Health Records☆20Updated 7 months ago
- Limited automatic tabular ML pipelines for generic MEDS datasets.☆14Updated last month
- A Multimodal Transformer: Fusing Clinical Notes With Structured EHR Data for Interpretable In-Hospital Mortality Prediction☆31Updated 2 years ago
- ☆22Updated 3 years ago
- Patient Code & Text Representation Learning☆20Updated last year
- The code for the paper "MediTab: Scaling Medical Tabular Data Predictors via Data Consolidation, Enrichment, and Refinement"☆18Updated 10 months ago
- ☆37Updated 2 years ago
- ☆24Updated 5 years ago
- This repository contains the code used for Temporal Pointwise Convolutional Networks for Length of Stay Prediction in the Intensive Care …☆77Updated last year
- An updated version of eICU Benchmark with an updated problem definition on LoS and Decompensation tasks☆11Updated 3 years ago