stardj / PharmHGT
Repo of pharmacophoric constrained heterogeneous-graph-transformer
☆17Updated 2 years ago
Alternatives and similar repositories for PharmHGT:
Users that are interested in PharmHGT are comparing it to the libraries listed below
- K-BERT for molecular property prediction.☆29Updated 2 years ago
- Implementation of ICLR23 paper "Molecule Generation for Target Protein Binding with Structural Motifs"☆66Updated last year
- ☆50Updated 8 months ago
- A bi-directional attention neural network for compound–protein interaction and binding affinity prediction.☆30Updated 2 years ago
- Official implementation for AAAI 2022 paper: "GeomGCL: Geometric Graph Contrastive Learning for Molecular Property Prediction".☆22Updated 2 years ago
- ☆18Updated last year
- ☆47Updated 4 years ago
- ☆21Updated 2 years ago
- ☆53Updated 2 years ago
- SSM-DTA: Breaking the Barriers of Data Scarcity in Drug-Target Affinity Prediction (Briefings in Bioinformatics 2023)☆52Updated 10 months ago
- Code for "FG-BERT: A Self-Supervised Molecular Representation Learning Method Based on Functional Groups"☆27Updated last year
- ☆11Updated last year
- PSICHIC (pronounced Psychic) - PhySIcoCHemICal graph neural network for learning protein-ligand interaction fingerprints from sequence da…☆100Updated 10 months ago
- ☆47Updated last year
- a novel DTA predition method using graph neural network☆73Updated last year
- a multi-property optimization method.☆32Updated 4 months ago
- ☆12Updated 3 years ago
- Bioinformatics'2022 PerceiverCPI: A nested cross-attention network for compound-protein interaction prediction☆35Updated last year
- A comprehensive repository dedicated to the collection and exploration of studies utilizing Large Language Models for molecular design, p…☆39Updated last year
- Geometry Deep Learning for Drug Discovery and Life Science☆67Updated last year
- Effective drug-target interaction prediction with mutual interaction neural network☆32Updated 2 years ago
- A unified framework for predicting drug-target interactions, binding affinities and activation/inhibition mechanisms.☆35Updated 2 months ago
- semi-supervised learning for molecular property prediction☆51Updated 3 years ago
- ☆25Updated last year
- ☆9Updated 3 years ago
- codes for KPGT (Knowledge-guided Pre-training of Graph Transformer)☆106Updated 7 months ago
- BridgeDPI: A Novel Graph Neural Network for Predicting Drug-Protein Interactions☆19Updated 4 months ago
- MGA☆42Updated 4 years ago
- AlphaDrug: Protein Target Specific De Novo Molecular Generation☆40Updated 2 years ago
- Molecule Optimization via Fragment-based Generative Models☆42Updated 2 years ago