peptide-MHC modeling, binding prediction, and protein design.
☆31Jul 24, 2026Updated 3 months ago
Alternatives and similar repositories for PMGen
Users that are interested in PMGen are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- Tool repository for CAR-PNN☆14Oct 7, 2026Updated 3 weeks ago
- ☆14Aug 26, 2026Updated 2 months ago
- Accompanying Repository to TCR-TRANSLATE paper.☆12Jun 26, 2026Updated 4 months ago
- AdaptiveFlow for Ligand Preparation (AFLP)☆10May 27, 2026Updated 5 months ago
- Propose CDR single-point mutations that rescue antibody expression without disrupting antigen binding, using bound vs. unbound ProteinMPN…☆16May 26, 2026Updated 5 months ago
- Proton VPN Special Offer - Get 70% off • AdSpecial partner offer. Trusted by over 100 million users worldwide. Tested, Approved and Recommended by Experts.
- BamQuery provides RNA-seq quantification for a given peptide (from 8 to 11 residues) in chosen RNA-seq samples (single or bulk).☆13Aug 12, 2024Updated 2 years ago
- pip install ipsae☆12Sep 15, 2025Updated last year
- ☆19Jun 11, 2026Updated 4 months ago
- ☆21Oct 26, 2024Updated 2 years ago
- BEER - Biophysical Evaluation Engine for Residues☆13Jun 16, 2026Updated 4 months ago
- Humanness of de-novo designed proteins☆48May 19, 2025Updated last year
- Code described in Harvey et al. 2026 (DOI: https://doi.org/10.1038/s41467-026-72093-5).☆11Oct 14, 2026Updated 2 weeks ago
- InstaNovo-FM: a self-supervised foundation model for proteomics☆14Oct 23, 2026Updated last week
- ☆14Sep 27, 2026Updated last month
- Managed Database hosting by DigitalOcean • AdPostgreSQL, MySQL, MongoDB, Kafka, Valkey, and OpenSearch available. Automatically scale up storage and focus on building your apps.
- ☆15Nov 18, 2025Updated 11 months ago
- Rank binders by structure modeling☆17Apr 10, 2026Updated 6 months ago
- Generative antibody language models for framework-conditioned CDR design, scoring, and preference-based alignment.☆14Updated this week
- SableBind is an open-source framework dedicated to predicting protein-ligand binding affinity☆13Feb 6, 2025Updated last year
- JAX translation of boltz☆32Aug 11, 2026Updated 2 months ago
- An open source version of EVQLV's HyperBindAI, a contrastive learning model for Ab-Ag interactivity.☆12Jun 11, 2025Updated last year
- Code & data for "Protein Language Models Expose Viral Mimicry and Immune Escape"☆13Sep 1, 2025Updated last year
- A unified cross-attention model for predicting antigen binding specificity to both HLA and TCR molecules☆16May 29, 2026Updated 5 months ago
- Antigen-receptor Design Against Peptide-MHC Targets☆22Jan 9, 2026Updated 9 months ago
- Wordpress hosting with auto-scaling - Free Trial Offer • AdFully Managed hosting for WordPress and WooCommerce businesses that need reliable, auto-scalable performance. Cloudways SafeUpdates now available.
- TFold v1.0☆37Jul 16, 2024Updated 2 years ago
- ☆12Jul 15, 2026Updated 3 months ago
- ☆56Jan 10, 2025Updated last year
- Inpainting protein sequence and structure☆13Nov 10, 2023Updated 2 years ago
- Agentic campaign control for adaptive, multi-method de novo protein binder design under finite compute budgets.☆24Sep 30, 2026Updated last month
- A Python package to manage protein design workflows on computing clusters and local machines. Documentation can be found here: https://pr…☆43Aug 17, 2026Updated 2 months ago
- Fast protein backbone flexibility prediction model☆42Sep 9, 2026Updated last month
- ☆82Updated this week
- ☆16Nov 20, 2024Updated last year
- Proton VPN Special Offer - Get 70% off • AdSpecial partner offer. Trusted by over 100 million users worldwide. Tested, Approved and Recommended by Experts.
- Open-source, commercially permissive implementation of the Germinal antibody design pipeline☆19Oct 17, 2026Updated 2 weeks ago
- [𝐧𝐚𝐭𝐮𝐫𝐞 𝐦𝐚𝐜𝐡𝐢𝐧𝐞 𝐢𝐧𝐭𝐞𝐥𝐥𝐢𝐠𝐞𝐧𝐜𝐞] ImmunoStruct enables multimodal deep learning for immunogenicity prediction☆53Oct 5, 2026Updated 3 weeks ago
- ☆33Aug 8, 2025Updated last year
- LIVIA (Local Interaction VIsualization and Analysis) — Analyze and visualize protein interaction interfaces from structure predictions. B…☆27Oct 23, 2026Updated last week
- Official implementation of "Rigidity-Aware Geometric Pretraining for Protein Design and Conformational Ensembles" (ICLR 2026)☆20Mar 16, 2026Updated 7 months ago
- Neural Iterative Selection-Expansion using LigandMPNN/LASErMPNN and Boltz-2x☆76Aug 11, 2026Updated 2 months ago
- Structural biology superpowers for AI coding agents: PyMOL, ChimeraX, AlphaFold DB, RCSB PDB, UniProt, and Rosetta workflows.☆10Jul 17, 2026Updated 3 months ago