lassoan / slicerioLinks
Utilities for reading and writing files created by 3D Slicer
☆39Updated 4 months ago
Alternatives and similar repositories for slicerio
Users that are interested in slicerio are comparing it to the libraries listed below
Sorting:
- An implementation of morphological contour interpolation☆33Updated last month
- This extension makes available Elastix medical image registration toolkit (http://elastix.isi.uu.nl/) available in Slicer.☆53Updated 4 months ago
- Examples that illustrate how to use 3D Slicer via Jupyter notebooks in Python☆75Updated 2 years ago
- An image analysis workflow for open and reproducible research on femoral knee cartilage☆33Updated 11 months ago
- This extension contains only a module with some tools to install PyTorch inside Slicer, using the best possible version.☆35Updated last year
- Example extension for 3D Slicer that demonstrates how to make a Python script available as a CLI module☆20Updated last year
- Recipes for common medical image segmentation tasks using 3D Slicer☆56Updated 2 years ago
- A project to provide custom sorting and renaming of dicom files☆78Updated last month
- Collection of utilities that are not polished implementations but can be useful to users☆84Updated 7 months ago
- Software for automatic segmentation and generation of standardized clinical reports of brain tumors from MRI volumes☆39Updated last month
- Very fast greedy diffeomorphic registration code☆77Updated 3 weeks ago
- Spatial Graph Extractor. Library and scripts to study graphs extracted from binary images, or to generate graphs and analyze them complet…☆5Updated 4 months ago
- Slicer extensions index☆73Updated this week
- A 3D Slicer extension for efficient segmentation with nnInteractive.☆66Updated this week
- An abundance of augmentation layers☆15Updated last month
- This repository contains the SlicerFreeSurferImporter extension for 3D Slicer. The extension implements a module for importing models, sc…☆17Updated last year
- ☆85Updated this week
- A single NIfTI image saved with all 48 spatial rotation permutations☆29Updated 3 years ago
- This project contains command line tools to perform rigid, affine and non-linear registration of nifti or analyse images as well as utili…☆156Updated last week
- TubeTK is an open-source toolkit for the segmentation, registration, and analysis of tubes and surfaces in images, developed by Kitware, …☆53Updated 2 months ago
- MIRTK based SVR reconstruction☆52Updated last month
- Softmax for Arbitrary Label Trees (SALT) is a framework for training segmentation networks using conditional probabilities to model hiera…☆79Updated 8 months ago
- Processing Library and Analysis Toolkit for Medical Imaging in Python☆132Updated last month
- Extension for 3D Slicer containing various tools for module development and debugging☆30Updated 5 months ago
- Skeleton segmentation in CT images☆21Updated 3 months ago
- Image analysis approaches to analyze the OAI magnetic resonance images☆25Updated 5 months ago
- Materials for the yearly PerkLab bootcamp course☆93Updated 9 months ago
- An open-source, free comprehensive software that will allow biomedical scientists to precisely locate shape changes in their imaging stud…☆60Updated 3 weeks ago
- 3D Slicer extension which contains a Segment Editor Effect that solidifies and extracts the surface of a segmentation☆32Updated last year
- Extension to import microCT data and conduct 3D morphometrics in Slicer☆104Updated 2 weeks ago