Alternatives and similar repositories for SlicerNotebooks

Users that are interested in SlicerNotebooks are comparing it to the libraries listed below

• Slicer / SlicerJupyter
  Extension for 3D Slicer that allows the application to be used from Jupyter notebook
  ☆254Updated last year
• fepegar / SlicerPyTorch
  This extension contains only a module with some tools to install PyTorch inside Slicer, using the best possible version.
  ☆35Updated 2 months ago
• rundherum / pymia
  pymia: A Python package for data handling and evaluation in deep learning-based medical image analysis
  ☆60Updated 9 months ago
• lassoan / slicerio
  Utilities for reading and writing files created by 3D Slicer
  ☆40Updated 7 months ago
• razorx89 / pydicom-seg
  Python package for DICOM-SEG medical segmentation file reading and writing
  ☆86Updated 2 years ago
• lassoan / SlicerElastix
  This extension makes available Elastix medical image registration toolkit (http://elastix.isi.uu.nl/) available in Slicer.
  ☆55Updated 2 weeks ago
• fepegar / SlicerTorchIO
  3D Slicer module for TorchIO.
  ☆23Updated last year
• NA-MIC / ProjectWeek
  Website for NA-MIC Project Weeks
  ☆91Updated 2 weeks ago
• lassoan / SlicerSegmentationRecipes
  Recipes for common medical image segmentation tasks using 3D Slicer
  ☆58Updated 3 years ago
• giesekow / deepvesselnet
  Implementation of the DeepVesselNet deep learning network
  ☆151Updated 2 years ago
• InsightSoftwareConsortium / ScientificImageAnalysisVisualizationAndArtificialIntelligenceCourse
  ☆88Updated last year
• pieper / dicomsort
  A project to provide custom sorting and renaming of dicom files
  ☆78Updated 3 months ago
• SlicerIGT / aigt
  Deep learning software modules for image-guided medical procedures
  ☆73Updated last month
• sbonaretti / pyKNEEr
  An image analysis workflow for open and reproducible research on femoral knee cartilage
  ☆33Updated last year
• jasonccai / HeadCTSegmentation
  Multi-class U-Net for head CT segmentation
  ☆34Updated 2 months ago
• MIC-DKFZ / niicat
  This is a tool to quickly preview nifti images on the terminal
  ☆64Updated 6 months ago
• pyushkevich / greedy
  Very fast greedy diffeomorphic registration code
  ☆81Updated 3 months ago
• MIC-DKFZ / BodyPartRegression
  ☆75Updated last month
• raidionics / Raidionics
  Software for automatic segmentation and generation of standardized clinical reports of brain tumors from MRI volumes
  ☆42Updated last month
• SimpleITK / TUTORIAL
  ☆113Updated last week
• fepegar / highresnet
  PyTorch implementation of HighRes3DNet
  ☆55Updated last month
• viswanath-lab / RadQy
  RadQy is a quality assurance and checking tool for quantitative assessment of magnetic resonance imaging (MRI) and computed tomography (C…
  ☆105Updated 3 weeks ago
• CCI-Bonn / HD-GLIO
  Automated deep-learning based brain tumor segmentation on MRI
  ☆33Updated 3 years ago
• balbasty / cornucopia
  An abundance of augmentation layers
  ☆16Updated last month
• balbasty / nitorch
  Neuroimaging in PyTorch
  ☆98Updated last month
• biomedia-mira / blast-ct
  Brain Lesion Analysis and Segmentation Tool for Computed Tomography
  ☆67Updated 2 years ago
• ellisdg / frangi3d
  Computes vesselness scores for 3-dimensional images.
  ☆71Updated 8 years ago
• ad12 / DOSMA
  An AI-powered open-source medical image analysis toolbox
  ☆63Updated last year
• ai-med / quickNAT_pytorch
  PyTorch Implementation of QuickNAT and Bayesian QuickNAT, a fast brain MRI segmentation framework with segmentation Quality control using…
  ☆104Updated 4 years ago
• bhklab / med-imagetools
  Transparent and reproducible medical image processing pipelines in Python.
  ☆49Updated 3 weeks ago