sergeyvilov / HSE_nn_tutorial_2021
deep learning-based variant caller
☆9Updated 2 years ago
Related projects ⓘ
Alternatives and complementary repositories for HSE_nn_tutorial_2021
- Understand DNA structure and how machine learning can be used to work with DNA sequence data.☆37Updated 3 years ago
- Machine Learning in Medical Bioinformatics☆21Updated 7 months ago
- ☆11Updated 6 months ago
- CNN architecture for predicting DNA binding sites for Transcription Factors☆48Updated 5 years ago
- This repository contains the code for our manuscript - 'The evolution, evolvability, and engineering gene regulatory DNA'☆93Updated last year
- ☆72Updated last month
- GSE analysis for microarray data, for the tutorial as shown in https://www.youtube.com/watch?v=JQ24T9fpXvg&t=947s☆16Updated 3 years ago
- My solution to Bioinformatics Specialization (Finding Hidden Messages in DNA; Genome Sequencing; Comparing Genes, Proteins, and Genomes; …☆83Updated 6 years ago
- Reproducible bioinformatics pipelines in python. Import any Unix tool/command in python.☆81Updated 3 years ago
- jupyter notebook; perform differential gene expression analysis using DESeq2 on TCGA RNAseq data☆29Updated 5 years ago
- ☆11Updated 5 months ago
- ☆29Updated last year
- Tutorials to get started in bioinformatics☆25Updated 2 years ago
- ☆23Updated 3 years ago
- Coursera MOOC Algorithms for DNA Sequencing by Ben Langmead, PhD, Jacob Pritt☆13Updated 9 years ago
- ☆73Updated 3 years ago
- Draw RNA secondary structures in python.☆43Updated 2 months ago
- ☆45Updated 3 years ago
- Source of Coursera online projects☆22Updated 8 years ago
- ☆13Updated 4 years ago
- ☆25Updated 3 years ago
- BioBombe: Sequentially compressed gene expression features enhances biological signatures☆64Updated 4 months ago
- immuneML is a platform for machine learning analysis of adaptive immune receptor repertoire data.☆62Updated this week
- Detailed explanation on how to setup database for NCBI IgBlast executable, and using it in Python☆28Updated 2 years ago
- A Python code for generating k-mer features for a set of DNA/ genomic sequences.☆28Updated 3 months ago
- Machine learning workflows for analyzing high-throughput protein data☆24Updated 8 years ago
- Code for 5UTR project☆24Updated last year
- Cross-platform normalization enables machine learning model training on microarray and RNA-seq data simultaneously☆34Updated last year
- Teaching materials for 6-7th March 2018 delivery of introductory bioinformatics training course for IBioIC.☆20Updated 6 years ago