richardxie1119 / SCCML
Cell classification by single cell mass spectrometry and machine learning
☆10Updated last year
Alternatives and similar repositories for SCCML:
Users that are interested in SCCML are comparing it to the libraries listed below
- ☆8Updated 4 months ago
- A small library to provide peak picking for software processing mass spectrometry data☆20Updated last month
- ☆23Updated 11 months ago
- A Python implementation of Baffling Recursive Algorithm for Isotopic distributioN calculations☆19Updated 2 weeks ago
- a deep learning-based retention time alignment tool for large cohort LC-MS data analysis☆11Updated last year
- A python client for the ClassyFire API☆16Updated 4 years ago
- ☆15Updated 3 years ago
- ☆10Updated 2 years ago
- ☆31Updated last month
- R Package for Systematic Optimization of Metabolomic Data Processing☆17Updated last year
- IsoCor: Isotope Correction for mass spectrometry labeling experiments☆24Updated last week
- A workflow for metabolite identification and accurate profiling in multidimensional LC-IM-MS-DIA measurements. DOI: 10.5281/zenodo.☆13Updated last year
- An open-source Python package to unify raw MS data accession and storage.☆18Updated last week
- Efficiently predicting high resolution mass spectra with graph neural networks☆26Updated last year
- mzSpecLib: A standard format to exchange/distribute spectral libraries☆25Updated 2 months ago
- Deep learning similarity measure for comparing MS/MS spectra with respect to their chemical similarity☆57Updated this week
- R-package - Automated Evaluation of Precursor Ion Purity for Mass Spectrometry Based Fragmentation in Metabolomics☆15Updated 8 months ago
- Untargeted metabolomics workflow for data processing and analysis written in Jupyter notebooks (Python)☆18Updated 2 months ago
- Streamlining Mass Spectrometry Data Visualization with Pandas☆11Updated 3 weeks ago
- A repository of compound-target annotations in support of Systematic Chemogenetic Library Assembly☆17Updated 4 years ago
- [Bioinformatics] 3DMolMS: prediction of tandem mass spectra from 3D molecular conformations☆21Updated last month
- A known-to-unknown metabolite identification workflow☆19Updated 4 years ago
- ☆33Updated last month
- A bioinformatic tool facilitating automated in-source fragmentation identification☆10Updated 2 years ago
- MetEx is a tool to extract and annotate metabolites from liquid chromatography–mass spectrometry data.☆16Updated last year
- pyQms, generalized, fast and accurate mass spectrometry data quantification☆28Updated 7 months ago
- This work was published on Analytical Chemistry: Full-Spectrum Prediction of Peptides Tandem Mass Spectra using Deep Neural Network☆28Updated last year
- ☆13Updated 3 years ago
- pDeep: Predicting MS/MS Spectra of Peptides with Deep Learning☆35Updated 5 years ago