OUT-OF-DATE! The new book is at https://bioimagebook.github.io
☆21Jan 2, 2017Updated 9 years ago
Alternatives and similar repositories for imagej-intro
Users that are interested in imagej-intro are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- ImageJ Macro Scripts showcased during Image Processing and Analysis for Life Scientists MOOC on EdX☆26Feb 17, 2020Updated 6 years ago
- Differential Dynamic Microscopy Analysis Code☆12Jun 25, 2025Updated last year
- Hands-on Sessions 1 and 2 at the Building Interpretable AI for Digital Pathology AMLD workshop 2021☆22Apr 28, 2021Updated 5 years ago
- An interactive image processing program for biologists written in Python.☆26Mar 4, 2026Updated 6 months ago
- N-dimensional, multiresolution file format for Micro-Manager☆16Jun 17, 2026Updated 3 months ago
- Deploy on Railway without the complexity - Free Credits Offer • AdConnect your repo and Railway handles the rest with instant previews. Quickly provision container image services, databases, and storage volumes.
- Digital Lens-less Holographic Microscopy plugin for ImageJ.☆15Mar 6, 2022Updated 4 years ago
- Graph-based Decoding for In Situ Sequencing☆10Jul 2, 2020Updated 6 years ago
- Projecting RNA measurements onto single cell atlases to extract cell type-specific expression profiles using scProjection☆16Aug 28, 2023Updated 3 years ago
- The repository of NEUBIAS textbook 2021☆10Jan 24, 2022Updated 4 years ago
- ☆18Jul 3, 2022Updated 4 years ago
- SlideJ: an ImageJ plugin for WSI processing☆17Nov 7, 2019Updated 6 years ago
- RNAseq Data Analysis Course, Cambridge University Bioinformatics Training Facility, September 2019☆17Nov 22, 2019Updated 6 years ago
- Predicted cell-cell interactions of the aging mouse brain☆21Sep 24, 2019Updated 6 years ago
- Fast, modular and reproducible generation of publication quality scientific figures and movies with only a few lines of code.☆17Apr 9, 2025Updated last year
- Managed hosting for WordPress and PHP on Cloudways • AdManaged hosting for WordPress, Magento, Laravel, or PHP apps, on multiple cloud providers. Deploy in minutes on Cloudways by DigitalOcean.
- Code for simulating a multi-view acquisition including attenuation, convolution, reduced sampling and poission noise☆12Jun 15, 2026Updated 3 months ago
- PyStokes: phoresis and Stokesian hydrodynamics in Python. github.com/rajeshrinet/pystokes☆51Jun 27, 2026Updated 2 months ago
- A hub to start the next generation of Microscope Control Software☆60Jan 7, 2021Updated 5 years ago
- Microscopy software framework☆26Sep 24, 2024Updated last year
- Outputs the current/next major, minor, and patch version based on the given semver version.☆10Jul 21, 2026Updated 2 months ago
- An introduction to bioimage analysis - http://bioimagebook.github.io☆76Feb 5, 2026Updated 7 months ago
- Carpentries lesson materials for the ROAR (Robust and Open Analysis in R) workshop☆16Aug 25, 2023Updated 3 years ago
- Place to discuss the future design of a universal microscope hardware interface☆17May 18, 2021Updated 5 years ago
- Software for universal camera control and frames acquisition☆19Feb 6, 2023Updated 3 years ago
- Deploy on Railway without the complexity - Free Credits Offer • AdConnect your repo and Railway handles the rest with instant previews. Quickly provision container image services, databases, and storage volumes.
- ☆16Aug 4, 2023Updated 3 years ago
- My experiments in data visualizations. Feel free to show your by giving a star☆15Apr 27, 2021Updated 5 years ago
- Code to download revisions of files from Dropbox, then use texcount to do a word count of them☆10Mar 26, 2016Updated 10 years ago
- python tools for BigDataViewer☆23Jul 2, 2026Updated 2 months ago
- Python bindings for scalar and vectorial models of the 3D microscope point spread function.☆59May 20, 2024Updated 2 years ago
- R package - Analysis of Single Cell Expression, Normalisation and Differential expression (ascend)☆22Aug 28, 2019Updated 7 years ago
- A Python module for accessing Hamamatsu DCIMG files☆14Jun 28, 2023Updated 3 years ago
- A set of Qt-based widgets onto the pymmcore-plus model☆22Jul 19, 2026Updated 2 months ago
- healthyR.ai - AI package for the healthyverse☆18Aug 22, 2026Updated last month
- Deploy on Railway without the complexity - Free Credits Offer • AdConnect your repo and Railway handles the rest with instant previews. Quickly provision container image services, databases, and storage volumes.
- ERVmap is one part curated database of human proviral ERV loci and one part a stringent algorithm to determine which ERVs are transcribed…☆27Sep 28, 2021Updated 4 years ago
- ☆15Jul 16, 2026Updated 2 months ago
- Convert .ims to .tif☆15Jul 15, 2021Updated 5 years ago
- A napari plugin to analysis point spread functions.☆11Apr 27, 2026Updated 4 months ago
- Various parts made for fluorescence microscopy + optics work☆19Jul 22, 2019Updated 7 years ago
- Automatic Correction for sCMOS-related Noise☆18Nov 18, 2021Updated 4 years ago
- A versatile image analysis software for biological image-based quantification using machine learning, especially for whole slide imaging.☆58Apr 16, 2021Updated 5 years ago