An interactive tool to explore low dimensional embeddings of omics data.
☆18Mar 27, 2026Updated 4 months ago
Alternatives and similar repositories for yomix
Users that are interested in yomix are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- ☆19May 25, 2026Updated 2 months ago
- A model context protocol (MCP) server for the EBI Ontology Lookup Service (OLS)☆26Jul 16, 2025Updated last year
- Python bindings for SingleR☆16May 6, 2026Updated 3 months ago
- RA Synovial Single-cell Multimodal Cell Atlas☆22Mar 6, 2024Updated 2 years ago
- Panache is a web-based interface designed for the visualization of linearized pangenomes. It can be used to show presence/absence informa…☆50Jun 7, 2023Updated 3 years ago
- Virtual machines for every use case on DigitalOcean • AdGet dependable uptime with 99.99% SLA, simple security tools, and predictable monthly pricing with DigitalOcean's virtual machines, called Droplets.
- ☆26Updated this week
- MEME motif-based sequence analysis tools (http://meme-suite.org), with FreeBSD tweaks☆16Jul 26, 2017Updated 9 years ago
- 🏃🏃 Your next-gen single-cell Foundation Model☆38Updated this week
- a dataloader to work with large single cell datasets from lamindb☆41May 20, 2026Updated 2 months ago
- A comprehensive and intelligent clinical phasing tool☆14Dec 3, 2022Updated 3 years ago
- Singular Genomics Demultiplexing Tool☆16Mar 5, 2024Updated 2 years ago
- Origin of Chromosomal Replication Assessment. Python tool for the analysis of circular bacterial DNA sequences in order to find their ori…☆18Oct 10, 2025Updated 10 months ago
- Interactive spatial transcriptomics viewer for h5ad files☆16Mar 14, 2026Updated 4 months ago
- Identify and quantify MHC eluted peptides from mass spectrometry raw data☆50Aug 3, 2026Updated last week
- 1-Click AI Models by DigitalOcean Gradient • AdDeploy popular AI models on DigitalOcean Gradient GPU virtual machines with just a single click. Zero configuration with optimized deployments.
- ☆20Jul 4, 2026Updated last month
- Pneumococcal Capsular Typing tool for NGS data☆18Apr 6, 2021Updated 5 years ago
- RNA-seq Analysis Pipeline Testing and Optimization Resource - Intelligent pipeline selection and comprehensive benchmarking.☆20Apr 28, 2026Updated 3 months ago
- A tool to compare two CSV files of SMILES strings, find overlapping compounds by InChIKey prefix, and generate an HTML visualization of …☆16Apr 20, 2025Updated last year
- Removing PCR duplicates for sequencing reads.☆14Sep 8, 2020Updated 5 years ago
- ☆12Sep 7, 2019Updated 6 years ago
- Python Toolkit for Transcription Factor Activity Inference and Clustering of scRNA-seq Data☆37Dec 15, 2025Updated 7 months ago
- Quickly get coverage statistics given reads and an assembly☆17May 13, 2024Updated 2 years ago
- This repository provides with custom code and analysis scripts to generate structural ensembles of intrinsically disordered proteins by u…☆24Oct 31, 2025Updated 9 months ago
- 1-Click AI Models by DigitalOcean Gradient • AdDeploy popular AI models on DigitalOcean Gradient GPU virtual machines with just a single click. Zero configuration with optimized deployments.
- Data visualization workshop☆11May 12, 2020Updated 6 years ago
- K-RET: Knowledgeable Biomedical Relation Extraction System☆11Feb 22, 2025Updated last year
- The Repository of the MLOps cookiecutter created by the Perioperative Data Science Team at UAB☆19Jul 29, 2026Updated last week
- ☆17Jan 6, 2023Updated 3 years ago
- Anomaly detection in time-series networks. Spatio-temporal Anomaly Detection☆12Jan 9, 2020Updated 6 years ago
- Async task queue + persistent memory for AI agents. Never lose context between sessions. Works with Claude Code, Remote Control, and Clau…☆25Apr 13, 2026Updated 3 months ago
- Google Colaboratory Notebooks for Computational Biochemistry☆21Jun 15, 2025Updated last year
- SmallSeqFlow: A streamlined, notebook-based bulk RNA-seq analysis pipeline optimized for small-sample studies with modular extensions.☆20Feb 23, 2025Updated last year
- Pareto Task Inference in Python☆23Aug 3, 2026Updated last week
- Wordpress hosting with auto-scaling - Free Trial Offer • AdFully Managed hosting for WordPress and WooCommerce businesses that need reliable, auto-scalable performance. Cloudways SafeUpdates now available.
- Bencharking pipeline for evaluating Transcriptomic representations for perturbation tasks☆15Nov 5, 2024Updated last year
- Template for creating a BioCypher-driven knowledge graph☆13Jan 15, 2026Updated 6 months ago
- Genotype likelihood simulator for VCF/BCF files☆17May 7, 2025Updated last year
- Plasmid exploration of bacterial genomes☆26Mar 2, 2022Updated 4 years ago
- Nextflow Pipeline for processing Streptococcus pneumoniae sequencing raw reads (FASTQ files) by the GPS Project (Global Pneumococcal Sequ…☆23Jun 5, 2026Updated 2 months ago
- VCF Zarr Specification☆18Jun 4, 2026Updated 2 months ago
- Multi-omics module that includes RNAseq, Epigenetics, and integrated multi-omics analyses developed as part of the NIGMS Sandbox project☆14Jun 6, 2025Updated last year