YerevaNN / BioRelExLinks
🧬 BioRelEx: Biological Relation Extraction Benchmark @ ACL BioNLP Workshop 2019
☆19Updated 5 years ago
Alternatives and similar repositories for BioRelEx
Users that are interested in BioRelEx are comparing it to the libraries listed below
Sorting:
- ☆24Updated 4 years ago
- Bio relation extraction labeled dataset☆45Updated 3 years ago
- CPI Extraction☆9Updated 2 years ago
- MIL-RBERT: A Data-driven Approach for Noise Reduction in Distantly Supervised Biomedical Relation Extraction (BioNLP @ ACL 2020)☆19Updated 2 years ago
- Improving Biomedical Pretrained Language Models with Knowledge [BioNLP 2021]☆65Updated 2 years ago
- Multimodal Transformers for biomedical text and Knowledge Graph data☆34Updated 2 years ago
- BiOnt: Deep Learning using Multiple Biomedical Ontologies for Relation Extraction☆26Updated last year
- Named Entity Recognition for biomedical entities☆47Updated 2 years ago
- CollaboNet for Biomedical Named Entity Recognition☆48Updated 6 years ago
- BioELMo is a biomedical version of embeddings from language model (ELMo), pre-trained on PubMed abstracts.☆33Updated 5 years ago
- Benchmarking for Biomedical Natural Language Processing Tasks with a Domain Specific ALBERT☆29Updated 3 years ago
- A collection of annotated biomedical corpora, which can be used for training supervised machine learning methods for various tasks in bio…☆36Updated 6 years ago
- Repository used to collect biomedical corpus on the Internet!☆35Updated 4 years ago
- Cross-type Biomedical Named Entity Recognition with Deep Multi-task Learning (Bioinformatics'19)☆135Updated 11 months ago
- Cross-domain data integration for named entity disambiguation in biomedical text☆11Updated 3 years ago
- FOBIE dataset and code for Semi-Open Relation Extraction, applied to Biology for Computer-Aided Biomimetics.☆35Updated 5 years ago
- Extracting biomedical relationships from literature with Snorkel 🏊☆58Updated 4 years ago
- ☆25Updated 2 years ago
- BioELECTRA☆50Updated 3 years ago
- MedDistant19: Towards an Accurate Benchmark for Broad-Coverage Biomedical Relation Extraction (COLING 2022)☆17Updated 2 years ago
- Corpus of Online Medical EnTities: the cometA corpus☆50Updated 3 months ago
- ☆48Updated last year
- Fast and Effective Biomedical Entity Linking Using a Dual Encoder☆19Updated 3 years ago
- Tools for working with the S800 corpus☆11Updated 4 years ago
- Codes for paper: Mixture-of-Partitions: Infusing Large Biomedical Knowledge Graphs into BERT☆34Updated 3 years ago
- BioFLAIR: Pretrained Pooled Contextualized Embeddings for Biomedical Sequence Labeling Tasks☆42Updated 5 years ago
- Using Huggingface to generate relation expressions☆15Updated 4 years ago
- Using pretrained language models for biomedical knowledge graph completion.☆47Updated 3 years ago
- ☆35Updated 4 years ago
- The corresponding code for our paper: A sequence-to-sequence approach for document-level relation extraction.☆63Updated last year