YerevaNN / BioRelEx
𧬠BioRelEx: Biological Relation Extraction Benchmark @ ACL BioNLP Workshop 2019
β19Updated 5 years ago
Alternatives and similar repositories for BioRelEx:
Users that are interested in BioRelEx are comparing it to the libraries listed below
- Bio relation extraction labeled datasetβ45Updated 3 years ago
- MIL-RBERT: A Data-driven Approach for Noise Reduction in Distantly Supervised Biomedical Relation Extraction (BioNLP @ ACL 2020)β19Updated last year
- Multimodal Transformers for biomedical text and Knowledge Graph dataβ34Updated 2 years ago
- BiOnt: Deep Learning using Multiple Biomedical Ontologies for Relation Extractionβ26Updated last year
- Named Entity Recognition for biomedical entitiesβ47Updated 2 years ago
- Extracting biomedical relationships from literature with Snorkel πβ58Updated 4 years ago
- β24Updated 3 years ago
- A collection of annotated biomedical corpora, which can be used for training supervised machine learning methods for various tasks in bioβ¦β36Updated 6 years ago
- BioELMo is a biomedical version of embeddings from language model (ELMo), pre-trained on PubMed abstracts.β33Updated 5 years ago
- A Silver Standard Corpus of Human Phenotype-Gene Relationsβ13Updated 2 years ago
- Improving Biomedical Pretrained Language Models with Knowledge [BioNLP 2021]β65Updated 2 years ago
- CPI Extractionβ9Updated 2 years ago
- Benchmarking for Biomedical Natural Language Processing Tasks with a Domain Specific ALBERTβ29Updated 3 years ago
- CollaboNet for Biomedical Named Entity Recognitionβ48Updated 6 years ago
- This repository contains supplementary data, and links to the model and corpora used for the paper: Transfer learning for biomedical nameβ¦β37Updated 6 years ago
- Tools for working with the S800 corpusβ11Updated 4 years ago
- Repository used to collect biomedical corpus on the Internet!β34Updated 4 years ago
- Cross-type Biomedical Named Entity Recognition with Deep Multi-task Learning (Bioinformatics'19)β135Updated 8 months ago
- FOBIE dataset and code for Semi-Open Relation Extraction, applied to Biology for Computer-Aided Biomimetics.β35Updated 4 years ago
- BioFLAIR: Pretrained Pooled Contextualized Embeddings for Biomedical Sequence Labeling Tasksβ42Updated 4 years ago
- Fast and Effective Biomedical Entity Linking Using a Dual Encoderβ19Updated 2 years ago
- BioELECTRAβ50Updated 3 years ago
- Codes for paper: Mixture-of-Partitions: Infusing Large Biomedical Knowledge Graphs into BERTβ33Updated 2 years ago
- β18Updated 3 years ago
- EMNLP'2021: Can Language Models be Biomedical Knowledge Bases?β56Updated 2 years ago
- Universal Dependencies (v1.0) for the GENIA 1.0 Treebank, along with additional raw abstracts and metadata.β22Updated 4 years ago
- β35Updated 4 years ago
- MedDistant19: Towards an Accurate Benchmark for Broad-Coverage Biomedical Relation Extraction (COLING 2022)β17Updated 2 years ago
- This repository contains the corpora and supplementary data, along with instructions for recreating the experiments, for our paper: "Towaβ¦β15Updated 5 years ago
- Corpus of Online Medical EnTities: the cometA corpusβ50Updated last month