convert bash/r/python history or unstructured code in snakefiles
☆12Jul 15, 2026Updated 3 months ago
Alternatives and similar repositories for snkmaker
Users that are interested in snkmaker are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- ☆21Updated this week
- ☆11Oct 9, 2026Updated 3 weeks ago
- ☆11Jul 3, 2022Updated 4 years ago
- Bokeh extensions to plot molecules easily☆11Jul 14, 2025Updated last year
- Pythie is a Python package to postprocess weather forecasts. Presently, it contains the modules: MBM: a module to make member-by-member e…☆11May 2, 2026Updated 6 months ago
- Open source password manager - Proton Pass • AdSecurely store, share, and autofill your credentials with Proton Pass, the end-to-end encrypted password manager trusted by millions.
- Post-verkko graph and assembly curation in Python.☆37Oct 24, 2026Updated last week
- A newly designed version of Bamsnap with Long Read Support (LRS) which inspired by bamsnap (https://github.com/parklab/bamsnap)☆14Oct 13, 2026Updated 3 weeks ago
- Style-based GAN for geophysical fields☆13May 7, 2020Updated 6 years ago
- Mahi-mahi is a command-line bioinformatics tool for analyzing tandem repeat loci from long-read nanopore sequencing data.☆17Oct 16, 2026Updated 2 weeks ago
- The repository contains code for the project "Explain the uncertain: Stochastic Shapley Values for Gaussian Process Models"☆17Jul 30, 2024Updated 2 years ago
- Everything but the kitchen sink☆13Feb 6, 2025Updated last year
- Connect to a LSF main node directly or trough a ssh jump node, launch a jupyter notebook via bsub and open automatically a tunnel. The n…☆20Oct 27, 2021Updated 5 years ago
- Code for RNA-seq gene coexpression analysis☆10Dec 23, 2021Updated 4 years ago
- Benchmarking deep learning models generating molecules in 3D☆20Apr 12, 2025Updated last year
- Managed Database hosting by DigitalOcean • AdPostgreSQL, MySQL, MongoDB, Kafka, Valkey, and OpenSearch available. Automatically scale up storage and focus on building your apps.
- MGcount github repository☆14Jan 19, 2023Updated 3 years ago
- Training materials for all things bioinformatics☆17Jun 29, 2026Updated 4 months ago
- Workflow to visualize pggb graphs in jbrowse☆11Mar 15, 2024Updated 2 years ago
- EMBO Practical Pangenomics Course 2026☆17Jun 22, 2026Updated 4 months ago
- GFA visualization tool - Rust reimplementation of odgi viz☆15May 2, 2026Updated 6 months ago
- Taxonomy classification of viral sequences / contigs☆13Jul 15, 2025Updated last year
- Official Repository for ZipStrain python package☆14Updated this week
- Package documentation and examples:☆10Oct 24, 2026Updated last week
- A Pyrodigal extension to predict genes in RNA viruses.☆12May 3, 2026Updated 5 months ago
- Wordpress hosting with auto-scaling - Free Trial Offer • AdFully Managed hosting for WordPress and WooCommerce businesses that need reliable, auto-scalable performance. Cloudways SafeUpdates now available.
- Source code of Statistical Computing 2 website☆12Feb 6, 2023Updated 3 years ago
- A python library to access and update the gauge/station database of MDR and compute randomForest QPE estimates☆10Sep 21, 2026Updated last month
- A python library to extract topographical features from elevation data.☆25Sep 23, 2026Updated last month
- ☆14Jul 30, 2026Updated 3 months ago
- PgRC: Pseudogenome based Read Compressor☆14Nov 20, 2024Updated last year
- KIV2/D4Z4 genotyper using HiFi WGS data☆18Aug 9, 2026Updated 2 months ago
- Content for https://slides.dornea.nu☆12Jan 17, 2024Updated 2 years ago
- ☆13Sep 17, 2026Updated last month
- A pure Python bare minimum implementation of the OPeNDAP server protocol.☆10Feb 28, 2022Updated 4 years ago
- Simple, predictable pricing with DigitalOcean hosting • AdAlways know what you'll pay with monthly caps and flat pricing. Enterprise-grade infrastructure trusted by 600k+ customers.
- Code for neural network parameterization project☆19Nov 6, 2023Updated 2 years ago
- Pilea: profiling bacterial growth dynamics from metagenomes with sketching☆13Oct 21, 2026Updated last week
- A Python library for creating adversarial splits☆14Jul 24, 2022Updated 4 years ago
- ☆19May 10, 2023Updated 3 years ago
- Scripts used to perform analyses in Rice et al. (2023)☆16Dec 28, 2023Updated 2 years ago
- Prefix-renaming FASTA records really fast.☆18Jun 26, 2024Updated 2 years ago
- An extension for Emacs Agent Shell to render math equations☆20Updated this week