mcapuccini / spark-tutorialLinks
Introduction to predictive modeling in Spark with applications in pharmaceutical bioinformatics
☆39Updated 9 years ago
Alternatives and similar repositories for spark-tutorial
Users that are interested in spark-tutorial are comparing it to the libraries listed below
Sorting:
- An example of bioinformatics and bigdata tools can playing nicely together☆14Updated 9 years ago
- VariantSpark is a framework for applying Spark-based Machine Learning methods to whole-genome variant information☆33Updated 7 years ago
- A Variant Caller, Distributed. Apache 2 licensed.☆71Updated 6 years ago
- Population Stratification Analysis on Genomics Data Using Deep Learning☆26Updated 8 years ago
- Spark-based variant calling, with experimental support for multi-sample somatic calling (including RNA) and local assembly☆84Updated 7 years ago
- Example Cloud Datalab iPython Notebooks for genomics use cases.☆24Updated 7 years ago
- Ready-to-go Parquet-formatted public 'omics datasets☆30Updated 9 years ago
- Tips and tricks for plotting in python☆28Updated 6 years ago
- Advanced BigQuery examples on genomic data.☆87Updated 8 years ago
- Some notebook examples related to Apache Spark, IPython / Jupyter, Zeppelin☆52Updated 9 years ago
- R on Apache Spark (SparkR) tutorials for Big Data analysis and Machine Learning as IPython / Jupyter notebooks☆122Updated 7 years ago
- Quality control methods for human genomic variants.☆62Updated 2 years ago
- Integrate the GA4GH schemas and probably a scala impl of the service.☆14Updated 9 years ago
- A scalable genome browser. Apache 2 licensed.☆125Updated 2 years ago
- Code, examples, reading list for JHU Frontiers of Sequencing Data Analysis class☆25Updated 11 years ago
- Deep neural networks on over 50 classification problems from the UC Irvine Machine Learning Repository☆25Updated 9 years ago
- Apache Spark jobs such as Principal Coordinate Analysis.☆75Updated 8 years ago
- R interface to Tensorflow via skflow☆18Updated 9 years ago
- Public Presentations☆24Updated 2 months ago
- Open source formats for scalable genomic processing systems using Avro. Apache 2 licensed.☆40Updated 4 months ago
- Sparklyr Extensions API☆32Updated 8 years ago
- Notes and code for learning Random Forests☆13Updated 2 years ago
- Parallel Genomic Analysis Toolkit☆14Updated 6 years ago
- Apache Zeppelin on Kubernetes.☆28Updated 6 years ago
- Mirror of Apache Zeppelin (Incubating)☆45Updated 9 years ago
- Latency numbers every data scientist should know (aka the pyramid of analytical tasks) - the order of magnitude of computational time for…☆20Updated 8 years ago
- Efficient, distributed downloads of large files from S3 to HDFS using Spark.☆17Updated 8 years ago
- Hadoop-BAM is a Java library for the manipulation of files in common bioinformatics formats using the Hadoop MapReduce framework☆70Updated 2 years ago
- This repository implements converters and tools for working with NGS data in HPC or Hadoop cluster☆17Updated 7 years ago
- Vagrant projects for various use-cases with Spark, Zeppelin, IPython / Jupyter, SparkR☆34Updated 9 years ago