Alternatives and similar repositories for spark-on-slurm

Users that are interested in spark-on-slurm are comparing it to the libraries listed below

• mcapuccini / TheSparkBox
  TheSparkBox is an all-in-one Spark deployment that you can use to fire up a local cluster.
  ☆12Updated 6 years ago
• cjprybol / reproducibility-via-singularity
  A demo and tutorial for how to use git and singularity to make your research more portable and reproducible
  ☆26Updated 8 years ago
• yvdriess / precipes
  Parallel Recipes : parallel workflow execution made easy
  ☆13Updated 9 years ago
• NIH-HPC / spark-slurm
  Tool for running/managing ad hoc spark clusters on a Slurm cluster
  ☆25Updated 2 years ago
• KHP-Informatics / bioindocker15
  [Bio in Docker] Symposium 2015
  ☆21Updated 7 years ago
• Teichlab / RCA
  Residual Component Analysis
  ☆10Updated 7 years ago
• kokrah / HTShape
  Shape analysis of high-throughput data
  ☆19Updated 9 years ago
• phnmnl / phenomenal-h2020
  Documentation and wiki for the PhenoMeNal H2020 E-Infrastructure Project
  ☆22Updated last month
• unlearnai / genemunge
  Tools for munging genomic data
  ☆21Updated 5 years ago
• bgruening / docker-ipython-notebook
  IPython running in a docker container. This image can be used to integrate IPython into Galaxy
  ☆17Updated 9 years ago
• tiagoantao / data-science-teaching
  Teaching data science
  ☆8Updated 8 years ago
• NLeSC / scriptcwl
  Create cwl workflows by writing a simple Python script
  ☆40Updated 5 years ago
• nextflow-io / cwl2nxf
  Import a CWL workflow specification to Nextflow script (experimental)
  ☆27Updated 6 years ago
• Steven-N-Hart / VariantDB_Challenge
  Finding a scalable alternative to the VCF File for genomics analysis
  ☆14Updated 8 years ago
• BauerLab / VariantSpark
  VariantSpark is a framework for applying Spark-based Machine Learning methods to whole-genome variant information
  ☆33Updated 7 years ago
• boutroslab / HTSvis
  A web app for exploratory data analysis of high-throughput screens (HTS)
  ☆17Updated 6 years ago
• olgabot / kvector
  kvector is a small utility for converting motifs to kmer vectors to compare motifs of different lengths
  ☆10Updated 7 years ago
• bmeg / funnel-client
  Trigger the Google Genomics Pipeline API with CWL
  ☆11Updated 8 years ago
• YeoLab / qtools
  qtools has helper functions to submit jobs to compute clusters (PBS on TSCC, SGE on oolite) from within Python
  ☆21Updated last year
• raphael-group / magi
  A web application from the Raphael Lab for mutation annotation and genome interpretation.
  ☆20Updated 7 years ago
• common-workflow-lab / gxargparse
  Automated CWL and Galaxy XML generation for Python tools that use argparse and click
  ☆11Updated 5 years ago
• cooperative-computing-lab / makeflow-examples
  Example workflows for the Makeflow workflow system.
  ☆33Updated 2 months ago
• phiweger / nanotext
  Proteins as words, genomes as documents.
  ☆20Updated 4 years ago
• NIH-HPC / singularity-examples
  example singularity definition files and demos
  ☆27Updated 6 years ago
• MaayanLab / FAIRshake
  ☆10Updated 6 months ago
• dmlond / docker_bwa_aligner
  Docker containers that demonstrate a proof of concept bwa alignment workflow
  ☆14Updated 10 years ago
• datasnakes / beRi
  beRi "beri environments for R installations" is an R environment, R installation, and R package management system for R
  ☆14Updated 5 years ago
• uio-cels / genomicgraphcoords
  Online material and code base for the article Coordinates and Intervals in Graph Based Reference Genomes
  ☆11Updated 8 years ago
• bartongroup / AlmostSignificant
  A server for maintaining high-throughput sequencing QC data
  ☆13Updated 2 years ago
• sjackman / docker-bio
  Docker images of bioinformatics software
  ☆21Updated 7 years ago