davidtellez / neural-image-compressionView external linksLinks
Code accompanying the paper Neural Image Compression for Gigapixel Histopathology Image Analysis
☆49Jun 6, 2023Updated 2 years ago
Alternatives and similar repositories for neural-image-compression
Users that are interested in neural-image-compression are comparing it to the libraries listed below
Sorting:
- Use streaming to train whole-slides images with single image-level labels, by reducing GPU memory requirements with 99%.☆78Jan 9, 2023Updated 3 years ago
- Official code for "Self-Supervised driven Consistency Training for Annotation Efficient Histopathology Image Analysis" Published in Medic…☆61Mar 5, 2022Updated 3 years ago
- Whole Slide Image segmentation with weakly supervised multiple instance learning on TCGA | MICCAI2020 https://arxiv.org/abs/2004.05024☆143Aug 5, 2021Updated 4 years ago
- MICCAI2020. "Multiple Instance Learning with Center Embeddings for Histopathology Image Classification"☆38Jan 22, 2021Updated 5 years ago
- Feature Aware Normalization - Code for "Context-based Normalization of Histological Stains using Deep Convolutional Features"☆15Nov 11, 2018Updated 7 years ago
- ☆17Aug 8, 2022Updated 3 years ago
- ☆11Jul 18, 2022Updated 3 years ago
- Dataset of 9536 H&E-stained patches for colorectal polyps classification and adenomas grading | ICIP21 https://doi.org/10.1109/ICIP42928.…☆34May 18, 2023Updated 2 years ago
- PFA-ScanNet: Pyramidal Feature Aggregation With Synergistic Learning for Breast Cancer Metastasis Analysis (Architecture Only Pytorch Imp…☆21Aug 8, 2019Updated 6 years ago
- Unofficial implementation for ScanNet (a fast WSI prediction method) in PyTorch.☆21Oct 3, 2023Updated 2 years ago
- Implementation of LA_MIL, Local Attention Graph-based Transformer for WSIs, PyTorch☆24Oct 13, 2023Updated 2 years ago
- ECCV-AIMIA 2022 paper: "Multi-Scale Attention-based Multiple Instance Learning for Classification of Multi-Gigapixel Histology Images"☆13Apr 8, 2023Updated 2 years ago
- Histopathology Image Analysis☆93Jul 6, 2023Updated 2 years ago
- An open-source digital pathology based rapid image annotation tool☆90Jan 27, 2026Updated 2 weeks ago
- ZoomMIL is a multiple instance learning (MIL) method that learns to perform multi-level zooming for efficient Whole-Slide Image (WSI) cla…☆68Nov 3, 2022Updated 3 years ago
- ☆37Oct 26, 2021Updated 4 years ago
- DSMIL: Dual-stream multiple instance learning networks for tumor detection in Whole Slide Image☆455Apr 29, 2024Updated last year
- Tool to visualize gigantic pathology images and use AI to segment cancer cells and present as an overlay☆76Jan 13, 2025Updated last year
- Self-Supervised Vision Transformers Learn Visual Concepts in Histopathology (LMRL Workshop, NeurIPS 2021)☆143Jun 9, 2022Updated 3 years ago
- Sparse Convolutional Context-Aware Multiple Instance Learning for Whole Slide Image Classification | https://arxiv.org/abs/2105.02726☆26Oct 11, 2021Updated 4 years ago
- Preprocessing module for large histological images☆21Jun 16, 2023Updated 2 years ago
- A standardized Python API with necessary preprocessing, machine learning and explainability tools to facilitate graph-analytics in comput…☆265Dec 23, 2023Updated 2 years ago
- 首个临床级别的 AI 系统可用源码☆69Dec 17, 2021Updated 4 years ago
- Computational Framework to Analyse Spatial Heterogeneity in Visum, IMC or MIBI data sets☆12May 3, 2022Updated 3 years ago
- Robust quad-tree based registration on whole slide images☆21Apr 2, 2025Updated 10 months ago
- Codes available of a paper: An Efficient Cervical Whole Slide Image Analysis Framework Based on Multi-scale Semantic and Location Deep Fe…☆16Jul 26, 2022Updated 3 years ago
- H&E histopathological staining normalization☆111Jan 24, 2020Updated 6 years ago
- SlideRunner is a tool for massive cell annotations in whole slide images☆80Jul 29, 2025Updated 6 months ago
- HistoQC is an open-source quality control tool for digital pathology slides☆317Dec 10, 2025Updated 2 months ago
- An optimized pipeline for working with Whole Slide Image (WSI) data in Tensorflow☆14Apr 30, 2021Updated 4 years ago
- Python wrapper library for PMA.start, a universal viewier for whole slide imaging and microscopy☆33Feb 3, 2026Updated last week
- Implementation of Cluster-to-Conquer: A Framework for End-to-End Multi-Instance Learning for Whole Slide Image Classification approach.☆59Oct 12, 2021Updated 4 years ago
- Whole Slide Digital Pathology Image Tissue Localization☆45Oct 3, 2023Updated 2 years ago
- ☆18Jun 24, 2019Updated 6 years ago
- A Python library of pre- and post-processing tools for applying deep learning to whole-slide images☆22Jan 16, 2023Updated 3 years ago
- SA-Diagnet: Self-attention-based network for diagnosing histopathological images☆28Jul 28, 2020Updated 5 years ago
- ☆29Jun 4, 2023Updated 2 years ago
- MICCAI2021 Paper: Self-supervised visual representation learning for histopathological images☆27Aug 29, 2022Updated 3 years ago
- Syntax - the arrangement of whole-slide-images and their image tiles to create well-formed computational pathology pipelines.☆55Nov 22, 2022Updated 3 years ago