Using correlated substitutions to infer recombination rates in RNA viruses
☆18Jan 26, 2023Updated 3 years ago
Alternatives and similar repositories for viral-mcorr
Users that are interested in viral-mcorr are comparing it to the libraries listed below
Sorting:
- Fair paper matching☆11Jan 20, 2020Updated 6 years ago
- Knowledge Discovery for COVID19: Search the full text of CORD19 research papers on COVID 19☆27Apr 22, 2020Updated 5 years ago
- ☆20Aug 29, 2024Updated last year
- Linguistically-Informed Self-Attention for Semantic Role Labeling (old version)☆27Dec 3, 2021Updated 4 years ago
- ☆10Jan 26, 2026Updated last month
- Inferring bacterial recombination rates from large-scale sequencing datasets.☆41Feb 25, 2023Updated 3 years ago
- Deep Inside-Outside Recursive Autoencoder☆89Jan 17, 2022Updated 4 years ago
- The R/Python scripts for the analysis of single-cell RNA-seq data from COVID-19 patients☆10Dec 16, 2020Updated 5 years ago
- Detecting recombination of viral lineages☆11Dec 23, 2025Updated 2 months ago
- class materials for MCB517A through UW/Fred Hutch☆12Dec 5, 2019Updated 6 years ago
- Single-cell/nuclei pipeline for data derived from Oxford Nanopore and 10X Genomics☆51Updated this week
- Screening Historical Events of Recombination in a Phylogeny via Ancestral Sequences☆10Sep 3, 2025Updated 6 months ago
- Nextflow pipeline to convert VCF files into MAF files.☆10Dec 12, 2025Updated 2 months ago
- Cloud-based molecular docking for everyone☆12Jul 1, 2024Updated last year
- ☆11Nov 22, 2024Updated last year
- Datamonkey - Run state-of-the-art statistical models through the comfort of your browser☆10Updated this week
- Simple Jupyter chat UI for LangChain☆11Jul 3, 2024Updated last year
- workflow to analysis of whole-exome-sequencing☆12Feb 12, 2020Updated 6 years ago
- ☆11Nov 10, 2015Updated 10 years ago
- PhyloSD: Phylogenomic Subgenome Detection pipeline☆11Jun 24, 2022Updated 3 years ago
- A web app to search pubmed☆12Jul 8, 2024Updated last year
- Tools for working with the S800 corpus☆12Sep 17, 2020Updated 5 years ago
- Collection of tools to retrieve siRNA (small interfering RNA) candidate sequences targeting your gene of interest from popular siRNA desi…☆18Nov 22, 2022Updated 3 years ago
- A web GUI for Slurm job management☆12Feb 23, 2023Updated 3 years ago
- Frankies Scalable, AI-Based Antibody Design Pipeline☆18Feb 20, 2026Updated 2 weeks ago
- Data and additional information from the initial MAS-ISO-seq study, "High-throughput RNA isoform sequencing using programmable cDNA conca…☆12Feb 24, 2023Updated 3 years ago
- ☆13Mar 22, 2022Updated 3 years ago
- A set of processes/pipelines for bioinformatics☆14Feb 24, 2026Updated last week
- Portable database of microhaplotype marker and allele frequency data☆11Oct 2, 2025Updated 5 months ago
- A quick and dirty rest interface to the slurm api and commands.☆12Nov 8, 2017Updated 8 years ago
- a pipeline for running MD simulations in the presence of probe molecules for druggability assessment☆12Dec 10, 2025Updated 2 months ago
- THIS PROJECT HAS MOVED! Check the link or README!☆14May 9, 2025Updated 10 months ago
- Code and data used in Mollentze et al. (2021) "Identifying and prioritizing potential human-infecting viruses from their genome sequences…☆17Dec 1, 2025Updated 3 months ago
- 📔 Use Make and {plumber} to create your own API and show live data in Quarto with R and Observable JS☆14Feb 28, 2024Updated 2 years ago
- This repository contains code powering "The Next-Generation Data Science Education with WebAssembly" Quarto website demonstration.☆13Nov 1, 2024Updated last year
- mlflow_on_kubeflow☆14Mar 6, 2021Updated 5 years ago
- ☆13Dec 3, 2024Updated last year
- Transcript discovery and quantification for long read single cell and spatial transcriptomics data using Bambu☆15Mar 2, 2026Updated last week
- Cube Schema☆13Updated this week