jennybc / stat540_2014Links
STAT540 Statistical Methods for High Dimensional Biology, January - April 2014
☆17Updated 11 years ago
Alternatives and similar repositories for stat540_2014
Users that are interested in stat540_2014 are comparing it to the libraries listed below
Sorting:
- Modeling and correcting fragment sequence bias for RNA-seq☆24Updated last year
- Various Ideas for Confounder Adjustment in Regression☆24Updated 2 years ago
- ☆22Updated 8 years ago
- R package for the recount2 project. Documentation website: http://leekgroup.github.io/recount/☆41Updated 6 months ago
- R package for Enrichment Depletion Logos (EDLogos) and String Logos☆27Updated 6 years ago
- Independent Hypothesis Weighting☆15Updated last year
- Query sequence data (VCF/BCF1/BCF2, Tabix, BGEN, PLINK) in R☆30Updated 8 months ago
- Effective Computing—Resources for Computational Biologists☆26Updated 5 years ago
- A hierarchical multiscale model for inferring transcription factor binding from chromatin accessibility data.☆26Updated 8 years ago
- countsimQC - Compare characteristic features of count data sets☆27Updated 2 months ago
- Materials for Module 2 of the SISBID Workshop, Visualization of Biomedical Big Data☆25Updated 7 years ago
- TeraStructure is a new algorithm to fit Bayesian models of genetic variation in human populations on tera-sample-sized data sets (10^12 o…☆49Updated 5 years ago
- Mitigating the adverse impact of batch effects in sample pattern detection☆9Updated 5 years ago
- R package for extracting mutation signatures from a list of somatic mutations☆37Updated 5 years ago
- ☆18Updated 8 years ago
- A R package for Grade of Membership model and Visualization of counts data:☆31Updated 4 years ago
- Examples of kallisto + sleuth☆11Updated 8 years ago
- Toolkit for QTL mapping and meta-analysis.☆17Updated 3 years ago
- Code and data resources accompanying Urbut et al (2017), "Flexible statistical methods for estimating and testing effects in genomic stud…☆24Updated 2 years ago
- Response to blog post about Salmon☆37Updated 7 years ago
- A Practical (And Opinionated) Guide To Analyzing 450K Data☆35Updated 10 years ago
- Materials for GCB535 at Penn.☆20Updated 6 years ago
- Course materials for the edX Data Analysis for Genomics☆36Updated 10 years ago
- Scripts for reproducing analyses of large RNA-seq datasets☆15Updated 6 years ago
- Code and simulations using biologically annotated neural networks☆21Updated 3 years ago
- 7C: Computational Chromosome Conformation Capture by Correlation of ChIP-seq at CTCF motifs☆13Updated 6 years ago
- Quantitative Trait Cluster Association Test in R☆25Updated 4 years ago
- Glimma R package☆50Updated 9 months ago
- Transcript quantification import with automatic metadata detection☆68Updated last month
- R markdown file to extract list of collaborators and affiliations from pubmed for NSF biosketch☆38Updated 7 years ago