iteal / wormpose
WormPose: Image synthesis and convolutional networks for pose estimation in C. elegans
☆46Updated last year
Related projects ⓘ
Alternatives and complementary repositories for wormpose
- Headless DeepLabCut (no GUI support)☆30Updated 3 years ago
- ☆15Updated 4 years ago
- AlphaTracker is a computer vision pipeline with the practical and real-time advantages , which requires minimal hardware requirements and…☆65Updated last year
- An annotation and instance segmentation-based multiple animal tracking and behavior analysis package.☆41Updated this week
- End-user version of the Mouse Action Recognition System (MARS)☆58Updated 7 months ago
- GUI to run DeepLabCut on live video feed☆58Updated 3 weeks ago
- High-throughput real-time tracker for delivery of stimuli and measurement of animal behavior.☆24Updated 8 months ago
- Animal Part Tracker☆72Updated this week
- ☆31Updated last year
- Repository for reproducing results in Lauer et al. 2022☆19Updated 2 years ago
- MagellanMapper is a graphical interface for 3D bioimage annotation, atlas registration, and regional quantification☆21Updated last week
- AICS Segmentation (One-Way) Mirror☆45Updated 3 years ago
- Multi-Worm Behaviour Tracker. README here:☆20Updated 2 years ago
- A napari plugin for direct 3D cell segmentation -- taking you through training, inference, and review of masks☆63Updated this week
- Omnipose: a high-precision solution for morphology-independent cell segmentation☆101Updated this week
- Track cells and build cell lineages☆27Updated 3 months ago
- A python algorithm for tracking cells in 3D time lapse images.☆52Updated 2 months ago
- Cell tracking and segmentation software☆93Updated this week
- A Primer on Motion Capture with Deep Learning:Principles, Pitfalls and Perspectives☆21Updated 3 years ago
- Object tracking with OpenCV in open field behavioral test (overhead view maze)☆51Updated 3 years ago
- A minimal package for saving and reading large HDF5-based chunked arrays.☆15Updated 2 years ago
- Closed-loop behavioral experiment toolkit using pose estimation of body parts.☆52Updated last year
- SDK for running DeepLabCut on a live video stream☆190Updated 8 months ago
- TensorFlow Deconvolution for Microscopy Data☆90Updated 2 years ago
- FreiPose: A Deep Learning Framework for Precise Animal Motion Capture in 3D Spaces☆18Updated 2 years ago
- paper figure code☆25Updated last year
- Create 3D/4D animations using a natural language-based syntax☆58Updated last year
- Cell tracker designed for tracking intestinal organoids☆19Updated this week
- A modular package to control stimulation and track behaviour☆44Updated this week
- The code for the Hidden Markov Model Generalized Linear Model used to model discrete complex behavior profiles of mice using neural activ…☆10Updated 2 years ago