iteal / wormposeLinks
WormPose: Image synthesis and convolutional networks for pose estimation in C. elegans
☆48Updated 2 years ago
Alternatives and similar repositories for wormpose
Users that are interested in wormpose are comparing it to the libraries listed below
Sorting:
- Headless DeepLabCut (no GUI support)☆30Updated 4 years ago
- An annotation and instance segmentation-based multiple animal tracking and behavior analysis package.☆49Updated this week
- Animal Part Tracker☆82Updated this week
- ☆14Updated 4 years ago
- SDK for running DeepLabCut on a live video stream☆210Updated 2 weeks ago
- Object tracking with OpenCV in open field behavioral test (overhead view maze)☆52Updated 3 years ago
- GUI to run DeepLabCut on live video feed☆61Updated 9 months ago
- Building rodent behavioral testing devices using the Raspberry Pi computer.☆19Updated 3 years ago
- The U-Net Segmentation plugin for Fiji (ImageJ)☆88Updated 2 years ago
- Code Implementation for EmbedSeg, an Instance Segmentation Method for Microscopy Images☆116Updated last year
- Multi-Worm Behaviour Tracker. README here:☆28Updated 2 weeks ago
- Scalable Optical Flow-based Image Montaging and Alignment☆79Updated this week
- ImJoy: Deep Learning Made Easy!☆189Updated last year
- Motion capture (markerless 3D pose estimation) pipeline and helper GUI for tethered Drosophila.☆91Updated last week
- A Primer on Motion Capture with Deep Learning:Principles, Pitfalls and Perspectives☆22Updated 3 years ago
- KNOSSOS is a software tool for the visualization and annotation of 3D image data and was developed for the rapid reconstruction of neural…☆76Updated last week
- ☆91Updated last year
- An open source online platform for collaborative image labeling of almost everything☆60Updated 3 weeks ago
- [Comms Bio 2023] Official Code for Fast Detection of Slender Bodies in High Density Microoscopy Data☆38Updated 10 months ago
- Track cells and build cell lineages☆35Updated 11 months ago
- A minimal package for saving and reading large HDF5-based chunked arrays.☆15Updated 3 years ago
- Deep Learning-Based Point-Scanning Super-Resolution (PSSR)☆81Updated last year
- Accelerated pose estimation and tracking using semi-supervised learning☆267Updated last week
- Efficient cell detection in large images using cellfinder in napari☆22Updated last year
- Omnipose: a high-precision solution for morphology-independent cell segmentation☆115Updated last week
- Three-dimensional propagation and time-reversal of fluorescence images☆40Updated 6 years ago
- Repository for WormSwin: Instance segmentation of C. elegans using vision transformer as appeared in Nature Scientific Reports 2023.☆13Updated last year
- The ImageJ plugin to run deep-learning models☆97Updated last week
- Conversion of neuroimaging data for display in Neuroglancer☆29Updated 7 months ago
- Neuroscience Landscape☆35Updated 11 months ago