Alternatives and similar repositories for wormpose:

Users that are interested in wormpose are comparing it to the libraries listed below

• DeepLabCut / DeepLabCut-core
  Headless DeepLabCut (no GUI support)
  ☆30Updated 3 years ago
• healthonrails / annolid
  An annotation and instance segmentation-based multiple animal tracking and behavior analysis package.
  ☆44Updated this week
• DeepLabCut / Primer-MotionCapture
  A Primer on Motion Capture with Deep Learning:Principles, Pitfalls and Perspectives
  ☆22Updated 3 years ago
• DeepLabCut / DeepLabCut-live-GUI
  GUI to run DeepLabCut on live video feed
  ☆60Updated 4 months ago
• kristinbranson / APT
  Animal Part Tracker
  ☆75Updated this week
• NeLy-EPFL / DeepFly3D
  Motion capture (markerless 3D pose estimation) pipeline and helper GUI for tethered Drosophila.
  ☆90Updated 3 months ago
• brainglobe / cellfinder-napari
  Efficient cell detection in large images using cellfinder in napari
  ☆23Updated last year
• nel-lab / FIOLA
  ☆33Updated last year
• dattalab / moseq-drugs
  ☆14Updated 4 years ago
• chen42 / openbehavior
  Building rodent behavioral testing devices using the Raspberry Pi computer.
  ☆18Updated 3 years ago
• AdaptiveMotorControlLab / CellSeg3D
  A napari plugin for direct 3D cell segmentation -- taking you through training, inference, and review of masks
  ☆78Updated 3 weeks ago
• kirkegaardlab / deeptangle
  Code implementation of the detection network capable of dealing with many overlapping spline bodies.
  ☆36Updated 5 months ago
• Tierpsy / tierpsy-tracker
  Multi-Worm Behaviour Tracker. README here:
  ☆22Updated 2 years ago
• tractatus / wholebrain
  R package for segmentation, registration and generating web-based brain atlases from microscope images
  ☆88Updated 3 years ago
• neuroethology / MARS
  End-user version of the Mouse Action Recognition System (MARS)
  ☆60Updated 10 months ago
• Lightning-Universe / Pose-app
  A Lightning app for animal pose estimation.
  ☆20Updated 2 months ago
• erturklab / delivr_cfos
  End-to-end light-sheet image analysis for mouse brains, with DL training data generated in VR
  ☆30Updated 6 months ago
• portugueslab / split_dataset
  A minimal package for saving and reading large HDF5-based chunked arrays.
  ☆15Updated 2 years ago
• SIPEC-Animal-Data-Analysis / SIPEC
  SIPEC: the deep-learning Swiss knife for behavioral data analysis
  ☆45Updated 5 months ago
• neuroethology / MARS_Developer
  For developers and people training MARS models
  ☆17Updated 11 months ago
• brainglobe / cellfinder-core
  Standalone cellfinder cell detection algorithm
  ☆19Updated last year
• aarac / DeepBehavior
  ☆32Updated 5 years ago
• lmb-freiburg / FreiPose-docker
  FreiPose: A Deep Learning Framework for Precise Animal Motion Capture in 3D Spaces
  ☆18Updated 2 years ago
• de-Bivort-Lab / margo
  High-throughput real-time tracker for delivery of stimuli and measurement of animal behavior.
  ☆24Updated 3 weeks ago
• sanderslab / magellanmapper
  MagellanMapper is a graphical interface for 3D bioimage annotation, atlas registration, and regional quantification
  ☆21Updated last week
• portugueslab / stytra
  A modular package to control stimulation and track behaviour
  ☆44Updated 3 months ago
• samuroi / SamuROI
  SamuROI - Structured analysis of multiple user-defined ROIs, an open source Python-based analysis environment for imaging data.
  ☆17Updated 5 years ago
• idTracker / idTracker
  Videotracking system that keeps track of individual identities. www.idtracker.es
  ☆36Updated 8 years ago
• AllenInstitute / aics-segmentation
  AICS Segmentation (One-Way) Mirror
  ☆45Updated 4 years ago
• JARVIS-MoCap / JARVIS-AnnotationTool
  AnnotationTool to create multi-view annotations for the JARVIS 3D Markerless Pose Estimation Toolbox
  ☆24Updated last year