ver228 / tierpsy-tracker
Multi-Worm Behaviour Tracker
☆24Updated 3 years ago
Related projects ⓘ
Alternatives and complementary repositories for tierpsy-tracker
- A testing pipeline that allows us to run a behavioural phenotyping of our virtual worm running the same test statistics the Schafer Lab u…☆48Updated 4 years ago
- NeuroTools is a collection of tools for representing and anlyzing neuroscientific data.☆30Updated 4 years ago
- Python package for analysis of dynamic fluorescence microscopy data☆100Updated 5 years ago
- benchmarking challenge for finding neurons in imaging data☆70Updated 5 years ago
- Z-Brain Viewer and Analysis Scripts for MAP-Mapping☆21Updated 5 years ago
- Deprecated: Read and write image data from and to TIFF files.☆61Updated 5 years ago
- Compression, denoising and demixing of functional imaging recordings☆28Updated 6 years ago
- ☆40Updated 4 years ago
- NEURON User Interface☆16Updated 6 years ago
- a Python machine learning library for neurophysiology data☆36Updated 6 years ago
- TensorFlow Deconvolution for Microscopy Data☆90Updated 2 years ago
- perspective-correct VR for freely moving animals engine☆17Updated last year
- SamuROI - Structured analysis of multiple user-defined ROIs, an open source Python-based analysis environment for imaging data.☆17Updated 5 years ago
- A library to facilitate machine learning on multi-dimensional images.☆77Updated last month
- A modular package to control stimulation and track behaviour☆44Updated this week
- A Graphical User Interface with 3D Visualization features for NEURON simulation enviroment☆30Updated last year
- jupyter notebook extension to visualize numpy arrays with the neuroglancer☆28Updated 6 years ago
- Deconvolution of calcium imaging data☆84Updated last month
- YASS: Yet Another Spike Sorter☆64Updated 2 years ago
- Adaptive Platform for Neuroscience Experiments☆38Updated 2 months ago
- Automatic cell detection in microscopy data using convolutional networks☆33Updated last year
- An interactive image processing program for biologists written in Python.☆22Updated 9 months ago
- Optical projection tomography microscope for isotropic whole-brain imaging☆15Updated 2 years ago
- ☆33Updated 3 years ago
- IaC codebase for the NeuroCAAS Platform☆34Updated 10 months ago
- ImageJ-specific applications of the SciJava script languages☆25Updated this week
- HNCcorr algorithm for neuron identification in calcium imaging datasets.☆12Updated last year
- The Browsable Atlas of Behavior-Anatomy Maps (BABAM) is a GUI for exploring hypotheses of correlations between neural activity in regions…☆11Updated last year
- Microscope control software☆66Updated last year
- Blazing fast calcium imaging analysis toolbox☆23Updated 7 years ago