thm-mni-ii / seaLinks
Space efficient (graph) algorithms
☆18Updated 4 years ago
Alternatives and similar repositories for sea
Users that are interested in sea are comparing it to the libraries listed below
Sorting:
- Online construction of run-length BWT (RLBWT) and r-index. Plus, online LZ77 parsing based on RLBWT.☆15Updated 7 years ago
- SetSketch: Filling the Gap between MinHash and HyperLogLog☆49Updated 4 years ago
- 🌳 A compressed rank/select dictionary exploiting approximate linearity and repetitiveness.☆11Updated 3 years ago
- Parallel Suffix Array, LCP Array, and Suffix Tree Construction☆49Updated 6 years ago
- FM-Index full-text index implementation using RRR Wavelet trees (libcds) and fast suffix sorting (libdivsufsort) including experimental r…☆107Updated 10 years ago
- Compact Tree Representation☆16Updated 8 years ago
- TU DOrtmund lossless COMPression framework☆19Updated 11 months ago
- Dynamic succinct/compressed data structures☆113Updated last year
- FOundation of stXXl and thriLL☆14Updated last year
- 🔶 Compressed bitvector/container supporting efficient random access and rank queries☆46Updated 11 months ago
- Succinct Data Structure Library☆107Updated 11 years ago
- Ultra fast MSD radix sorter☆11Updated 5 years ago
- Source code for the Shifted Hamming Distance (SHD) filtering mechanism for sequence alignment. Described in the Bioinformatics journal pa…☆35Updated 5 years ago
- C++ Implementations of sketch data structures with SIMD Parallelism, including Python bindings☆155Updated last year
- C++17 Implementation of Dynamic Filter Trie☆8Updated 3 years ago
- An optimal space run-length Burrows-Wheeler transform full-text index☆66Updated 2 years ago
- BWT Text Indexing Library: a set of tools to work with BWT-based text indexes☆25Updated 3 years ago
- similarity join and search algorithms for edit distance and jaccard☆18Updated 7 years ago
- Wavelet tree based on a fixed block boosting technique☆16Updated 4 years ago
- C++ Implementation of Zip Trees☆14Updated 2 years ago
- Relative data structures based on the BWT☆12Updated 7 years ago
- Suite of universal indexes for Highly Repetitive Document Collections☆20Updated 5 years ago
- Succinct Data Structure Library 3.0☆94Updated 3 months ago
- A cheatsheet for most common Stringology tasks☆15Updated 4 years ago
- A SIMD-based C++ library providing rank/select queries over mutable bitmaps.☆35Updated 2 years ago
- Optimal partitioning of Variable-Byte codes for better compression and fast decoding.☆17Updated 3 years ago
- implementation of dynamic wavelet matrix(tree) and static wavelet matrix☆22Updated 6 years ago
- Compact Data Structures Library☆101Updated 3 years ago
- Compact Data Structures Library☆128Updated 10 years ago
- COllapsed and COmpressed trie: a data-aware compressed string dictionary☆35Updated 5 months ago