gcollet / MstatX
A multiple alignment analyser
☆20Updated 3 years ago
Alternatives and similar repositories for MstatX:
Users that are interested in MstatX are comparing it to the libraries listed below
- Bacterial Annotation by Learned Representation of Genes☆54Updated 4 years ago
- Kmer-db is a fast and memory-efficient tool for large-scale k-mer analyses (indexing, querying, estimating evolutionary relationships, et…☆85Updated 2 months ago
- Malleable All-seeing Journal Of Research Artifacts☆36Updated last year
- http://www.combio.pl/alfree☆22Updated 2 years ago
- locally query the ncbi taxonomy☆39Updated 2 years ago
- A toolkit for annotation of transposable element families from unassembled sequence reads☆30Updated last year
- A fork of exonerate: a generic tool for sequence alignment☆64Updated last year
- PaperBLAST: find papers about a protein or its homologs☆38Updated last week
- GSAlign: an ultra-fast sequence alignment algorithm for intra-species genome comparison☆53Updated 9 months ago
- de novo virus assembler of Illumina paired reads☆54Updated 3 years ago
- Simple phylogenetic tree visualization python package for phylogenetic analysis☆44Updated 4 months ago
- Gfapy: a flexible and extensible software library for handling sequence graphs in Python☆66Updated 3 months ago
- Find common blocks and differences between DNA sequences☆40Updated 2 years ago
- A versatile toolkit for k-mers with taxonomic information☆77Updated 5 months ago
- Detection of incorrectly labeled sequences across kingdoms☆81Updated 2 years ago
- Reference-guided multiple sequence alignment of viral genomes☆65Updated 3 weeks ago
- Convert genbank files to a swath of other formats☆14Updated last year
- ☆26Updated 3 years ago
- orthology assignment using phylogenetic and network analyses☆46Updated 3 months ago
- FAST: Fast Analysis of Sequences Toolbox☆31Updated 5 years ago
- ARTIC SARS-CoV-2 workflow and reporting☆50Updated last month
- Design degenerated primers on highly variable alignments for full genome sequencing or qPCR. Specifically developed for viruses.☆35Updated 4 months ago
- Protein Alignment and Detection Interface☆61Updated 9 months ago
- A console-based alignment viewer☆107Updated last week
- Add biological annotations to variants in a given VCF file.☆28Updated 3 years ago
- Prepares a SARS-CoV-2 submission for GISAID, NCBI or ENA. Can read GISAID or NCBI files, or plain fasta+tsv/csv/xls. Finds files in input…☆35Updated 2 years ago
- ☆25Updated last year
- Multiple sequence alignment visualizer☆29Updated 2 years ago
- Simka and SimkaMin are comparative metagenomics methods dedicated to NGS datasets.☆47Updated 2 years ago
- Multi-platform genome assembly pipeline for Illumina, Nanopore and PacBio reads☆58Updated 4 months ago