An interactive image processing program for biologists written in Python.
☆25Sep 4, 2025Updated 6 months ago
Alternatives and similar repositories for flika
Users that are interested in flika are comparing it to the libraries listed below
Sorting:
- pipeline for volumetric cell segmentation☆14Feb 12, 2026Updated 3 weeks ago
- Various parts made for fluorescence microscopy + optics work☆16Jul 22, 2019Updated 6 years ago
- Optimization of single-cell biophysically detailed models☆15Jul 17, 2020Updated 5 years ago
- Fast and Accurate 3D PSF Computation for Fluorescence Microscopy☆48Oct 28, 2025Updated 4 months ago
- OUT-OF-DATE! The new book is at https://bioimagebook.github.io☆21Jan 2, 2017Updated 9 years ago
- Simple demo of structured illumination microscopy image fusion via Richardson-Lucy deconvolution☆23Dec 12, 2017Updated 8 years ago
- Python syntax generator based on Object-Oriented Programing, type hints, and simplicity☆10Sep 26, 2021Updated 4 years ago
- An OpenSource LED stimulator for visual and optogenetics stimulation in combination with 2-photon recording☆32Nov 8, 2021Updated 4 years ago
- ImSwitch is a software solution in Python that aims at generalizing microscope control by providing a solution for flexible control of mu…☆82Updated this week
- 'minis' is a software for electrophysiological data analysis. It allows you to detect and analyse spontaneous postsynaptic potetnials/cur…☆11Dec 29, 2024Updated last year
- Deeply supervised density regression for automatic cell counting in microscopy images☆12Jan 31, 2022Updated 4 years ago
- Reproduction of popular methods for class-incremental learning in image recognition and proposal of a new variant.☆10Jan 21, 2021Updated 5 years ago
- Official code for "Blind Image Deblurring Based on Dual Attention Network and 2D Blur Kernel Estimation" (ICIP 2021)☆13Nov 11, 2025Updated 3 months ago
- Connectome-based predictive modeling analysis with CONN toolbox outputs☆11Dec 20, 2021Updated 4 years ago
- 51单片机超轻量级实时操作系统，适合在8051为内核的MCU上运行☆11Jan 21, 2023Updated 3 years ago
- ☆11May 16, 2025Updated 9 months ago
- Implementation of various label fusion approaches for medical imaging.☆14May 29, 2025Updated 9 months ago
- Bio-inspired neuromorphic cerebellum☆10Sep 29, 2023Updated 2 years ago
- This rep contains the module for using pairs of focused-defocused images acquired by an optical instrument (telescope or microscope) wit…☆14Jan 14, 2022Updated 4 years ago
- ☆10Nov 9, 2020Updated 5 years ago
- Cell Segmenter using Machine Learning☆10Aug 1, 2023Updated 2 years ago
- "In my opinion, our health care system has failed when a doctor fails to treat an illness that is treatable." ― Kevin Alan Lee☆14May 13, 2020Updated 5 years ago
- Matplotlib Image labeller for classifying images☆11Jan 5, 2026Updated 2 months ago
- ☆10Mar 5, 2025Updated last year
- The Colour Deconvolution 2 ImageJ plugin implements stain unmixing with Ruifrok and Johnston’s method described in [Ruifrok AC, Johnston …☆12Aug 5, 2022Updated 3 years ago
- Fast, modular and reproducible generation of publication quality scientific figures and movies with only a few lines of code.☆17Apr 9, 2025Updated 10 months ago
- Pure Python library for reading NIS Elements ND2 images and metadata☆49Jan 15, 2025Updated last year
- Python package for analysis of dynamic fluorescence microscopy data☆103Mar 14, 2019Updated 6 years ago
- Extended depth of field methods using CNN's☆14Apr 28, 2023Updated 2 years ago
- Code for the paper "Reflectance-guided, contrast-accumulated histogram equalization" published in ICASSP 2020.☆10Sep 15, 2022Updated 3 years ago
- Real-time image-based autofocus for all wide-field optical microscopy systems☆12Mar 24, 2022Updated 3 years ago
- A deep learning model for protein subcellular localization based on immunohistochemistry images☆10Oct 12, 2019Updated 6 years ago
- Source code for EMSE 2023 paper "Zero-Shot Code Representation Learning via Prompt Tuning"☆13Feb 15, 2023Updated 3 years ago
- Open source smFRET confocal microscope☆11Jul 21, 2021Updated 4 years ago
- Plugin for the quantitative analysis of immunohistochemistry samples☆11Jul 29, 2017Updated 8 years ago
- NeuraPy is a collection of python modules useful for analyzing data obtained in neurophysiological experiments.☆15Oct 30, 2013Updated 12 years ago
- VolFormer: Explore More Comprehensive Cube Interaction for Hyperspectral Image Restoration and Beyond☆23Mar 16, 2025Updated 11 months ago
- Align the hyperspectral image with the RGB image☆10Jul 2, 2022Updated 3 years ago
- CloudReg☆11Apr 5, 2024Updated last year