flekschas / hipilerLinks
Visual exploration of large genome interaction matrices with interactive small multiples.
☆13Updated 4 years ago
Alternatives and similar repositories for hipiler
Users that are interested in hipiler are comparing it to the libraries listed below
Sorting:
- Vials is a Caleydo Web application for visualizing alternative splicing based on mRNAseq data.☆13Updated 8 years ago
- Clodius is a tool for breaking up large data sets into smaller tiles that can subsequently be displayed using an appropriate viewer.☆39Updated 9 months ago
- Efficient handling of FASTQ files from Python☆51Updated 2 months ago
- Platform for integrating genomic analysis with Jupyter Notebooks.☆44Updated 6 months ago
- ☆30Updated last year
- Simple interface to BioMart (Python -> rpy2 -> R/BioConductor's biomaRt)☆16Updated 11 years ago
- OLD REPOSITORY - Go to☆31Updated 8 years ago
- Epigenetic Variability and Transcription Factor Motifs Analysis Pipeline☆31Updated 8 years ago
- Flexible Integration of Data with Deep LEarning☆51Updated 2 years ago
- Software for exploration of gene expression data from single-cell RNA sequencing.☆28Updated 6 years ago
- Find nodes in hierarchical clustering that are statistically significant☆32Updated 8 years ago
- User-friendly Bioinformatics Tools☆18Updated 4 years ago
- Software for comparing contact maps from HiC, CaptureC and other 3D genome data.☆26Updated 7 years ago
- HiGlass track for displaying arcs between disconnected regions☆10Updated 3 years ago
- Computational biology utility scripts☆19Updated 9 months ago
- WebGL-based viewer for spatially-resolved transcriptomics data☆28Updated 3 years ago
- Deep Feature Interaction Maps (DFIM)☆54Updated 6 years ago
- Slides and demos from our SciPyConf 2019 talk☆13Updated 4 years ago
- Simple and efficient access to genomic data for deep learning models.☆42Updated 6 years ago
- Genome Contact Map Explorer - gcMapExplorer. Visit:☆21Updated 4 years ago
- requirements, examples, and tests for expression matrix file formats☆22Updated 7 years ago
- sequence alignment. global, local, glocal.☆42Updated 9 years ago
- Boiler: a software tool for highly efficient, lossy compression of RNA-seq alignments☆13Updated 9 years ago
- Paired Genomic Loci Tool Suite☆34Updated 3 years ago
- Robust, tested workflows for RNA-seq, ChIP-seq and other high-throughput sequencing analysis☆23Updated last week
- Framework for integrated analysis and plotting of ChIP/RIP/RNA/*-seq data☆87Updated 5 years ago
- Processing and plotting tools for genomics data☆22Updated last week
- Python module for the easy handling and analysis of DNase-seq data☆37Updated 6 years ago
- 3D Genome Browser☆32Updated 4 years ago
- Core functionality of the CGAT code☆34Updated 5 months ago