fabilab / iplotxLinks
Visualise networks and trees in Python, with style.
☆79Updated last month
Alternatives and similar repositories for iplotx
Users that are interested in iplotx are comparing it to the libraries listed below
Sorting:
- A simple Snakemake profile for Slurm without --cluster-config☆165Updated last year
- A template for standard compliant snakemake-workflows☆121Updated this week
- A declarative interactive genomics visualization library for Python.☆233Updated last month
- A Snakemake executor plugin for submitting jobs to a SLURM cluster☆45Updated last month
- Example notebooks of pyCircos☆29Updated 3 years ago
- Python translation of the hybrid dynamicTreeCut method as created by Peter Langfelder and Bin Zhang.☆41Updated 4 years ago
- Fishers Exact Test for Python (Cython)☆67Updated 9 months ago
- A short tutorial on getting started with Snakemake for workflow management☆56Updated 6 years ago
- A simple pythonic interface to biomart.☆57Updated 5 years ago
- GO enrichment with python -- pandas meets networkx☆88Updated 5 years ago
- Monitor computational workflows in real time☆73Updated last year
- A Github action for running a Snakemake workflow☆62Updated last month
- Python bindings to and Jupyter Notebook+Lab integration for the HiGlass viewer☆64Updated last month
- LaTeX template to create a compiled PDF (text+figures) e.g. for bioRxiv.org☆21Updated 9 years ago
- Turn an existing conda environment into a Singularity container☆82Updated 3 years ago
- Demonstrating best practices for bioinformatics command line tools☆117Updated 5 years ago
- Cookiecutter for snakemake slurm profile☆134Updated last year
- Linear mixed model for genomic analyses.☆112Updated 4 years ago
- Extension of the WGCNA program to improve the eigengene similarity of modules and increase the overall number of genes in modules.☆66Updated 4 years ago
- Documentation of the Snakemake-Profiles project.☆54Updated 3 years ago
- Python library to simulate evolutionary sequence data☆80Updated 4 years ago
- Python, R and Matlab implementation of Brown's Method to combine dependent P-values☆25Updated 7 years ago
- Methods for summarizing and visualizing multi-biosample functional genomic annotations☆46Updated 9 months ago
- Curated list of bioinformatics formats and publications☆54Updated 6 years ago
- python package to read and write the Newick format☆48Updated 10 months ago
- Framework for efficient high-dimensional association analyses.☆18Updated 4 years ago
- Genomic interval operations on Pandas DataFrames☆185Updated 2 weeks ago
- a minimal, scriptable genome browser for python☆53Updated last year
- Module for embedding igv.js in an IPython notebook☆80Updated 11 months ago
- Blazing-Fast Bioinformatic Operations on Python DataFrames☆143Updated last month