fabilab / iplotxView external linksLinks
Visualise networks and trees in Python, with style.
☆82Feb 4, 2026Updated last week
Alternatives and similar repositories for iplotx
Users that are interested in iplotx are comparing it to the libraries listed below
Sorting:
- A Python library for graph coloring☆12Nov 12, 2025Updated 3 months ago
- Rxiv-Maker is a GitHub-native framework that converts markdown into a publication-ready PDF. It automates scientific preprint generation …☆26Feb 5, 2026Updated last week
- FFPopSim is a collection of C++ classes and a Python interface for efficient simulation of large populations, in particular when the prod…☆14Oct 14, 2025Updated 3 months ago
- ⚡️ The "1-Minute RAG Audit" — Generate QA datasets & evaluate RAG systems in Colab, Jupyter, or CLI. Privacy-first, async, visual reports…☆28Feb 7, 2026Updated last week
- SciCount is tool focused on counting and classifying of objects in image-like data and scientific images, with training and example datas…☆11Oct 24, 2023Updated 2 years ago
- UNRAVEL: UN-biased high-Resolution Analysis and Validation of Ensembles using Light sheet images☆13Updated this week
- Cell Heterogeneity Accounted cLonal Methylation (CHALM)☆10Jul 6, 2021Updated 4 years ago
- Napari plugin for custom analysis and visualization of lattice lightsheet and Oblique Plane Microscopy data. The plugin is optimized for …☆14Feb 4, 2026Updated last week
- Benchmark graphs for community detection☆18Jun 22, 2024Updated last year
- small RNA analysis programs: standalone jar files (sRNAbench, sRNAde, etc), manuals and Docker image☆16Jan 16, 2023Updated 3 years ago
- 3DGB is a workflow to build 3D models of genomes from HiC data☆13Jan 26, 2026Updated 2 weeks ago
- Repo for a workshops and presentations about ROS2 and Python☆12Mar 14, 2025Updated 10 months ago
- InVivoTools a set of neurophysiology tools, forked from VanHooserTools, containing tools for visual stimulation and analysis of calcium i…☆14Oct 12, 2025Updated 4 months ago
- Python client to integrate Cleanlab Codex with your AI Agent☆19Nov 19, 2025Updated 2 months ago
- An agentic runtime that enables secure, extensible and configurable AI automation from any model☆17Jan 19, 2026Updated 3 weeks ago
- A software suite for Probe Design and Proximity Detection for targeted chromosome conformation capture applications☆12Feb 4, 2026Updated last week
- Analysing the genomic context of mobile genes☆11Jul 21, 2025Updated 6 months ago
- ☆12Sep 5, 2025Updated 5 months ago
- Annotation of filaments and other curvilinear structures in 3D.☆12Oct 9, 2023Updated 2 years ago
- A napari plugin for counting organoids from brightfield microscopy images with deep learning☆13Feb 4, 2026Updated last week
- ☆13May 1, 2025Updated 9 months ago
- Repo for MGraph project☆13Jan 10, 2026Updated last month
- Package Homepage: http://bioconductor.org/packages/devel/bioc/html/DRIMSeq.html Bug Reports: https://support.bioconductor.org/p/new/post/…☆12Aug 5, 2020Updated 5 years ago
- A centralized repository for network analysis tools.☆11Dec 16, 2019Updated 6 years ago
- Joint normalization of multiple Hi-C matrices, visualization and detection of differential chromatin interactions, supporting covariates.☆10Apr 22, 2022Updated 3 years ago
- Brain flatmaps generation☆11Oct 5, 2022Updated 3 years ago
- A Probably Private mini-course introducing AI/ML security via interactive videos and hands-on examples.☆25Dec 3, 2025Updated 2 months ago
- R functions for very fast eigenvector calculation☆11Jan 18, 2023Updated 3 years ago
- miARma-seq: a comprehensive tool for miRNA, mRNA and circRNA analysis☆16Jun 29, 2025Updated 7 months ago
- Scripts and notebooks used in Akgol Oksuz et al. paper☆11Jan 18, 2021Updated 5 years ago
- HiGlass track for displaying arcs between disconnected regions☆10Dec 13, 2022Updated 3 years ago
- A hash map using the BooPHF perfect hash function☆13Sep 25, 2016Updated 9 years ago
- R package to evaluate reproducibility of Hi-C data☆10Mar 16, 2023Updated 2 years ago
- A reference panel guided topological structure annotation of Hi-C data☆10Mar 23, 2023Updated 2 years ago
- Cython API for the Mutation Annotated Tree (MAT) Online Phylogenetics Toolkit☆14May 28, 2025Updated 8 months ago
- Pre-print:☆11Oct 17, 2023Updated 2 years ago
- openwebui-chat-client is a comprehensive, stateful Python client library for the OpenWebUI API.☆27Jan 10, 2026Updated last month
- FIREcaller: an R package for detecting frequently interacting re-gions from Hi-C data☆12Nov 4, 2022Updated 3 years ago
- Arima Capture HiC pipeline (Arima-CHiC)☆11May 16, 2024Updated last year