Native Python library for generic sequence alignment
☆57Apr 16, 2020Updated 6 years ago
Alternatives and similar repositories for python-alignment
Users that are interested in python-alignment are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- Python implementaion of optimal string alignment algorithm of SparseDamerauLevenshteinAutomaton for string fuzzy match.☆13Aug 11, 2016Updated 10 years ago
- R package providing basic command line optional argument parsing☆12May 9, 2026Updated 3 months ago
- PyTorch Code for the Paper: "Exploiting Uncertainty of Loss Landscape for Stochastic Optimization [Bhaskara et al. (2019)]☆16Apr 30, 2026Updated 3 months ago
- A collection of utilities to gain user path insights from exported FullStory data.☆12Sep 13, 2023Updated 2 years ago
- Regulatory network inference and driver gene evaluation using integrative multi-omics analysis and penalized regression☆17Jan 26, 2026Updated 6 months ago
- Virtual machines for every use case on DigitalOcean • AdGet dependable uptime with 99.99% SLA, simple security tools, and predictable monthly pricing with DigitalOcean's virtual machines, called Droplets.
- simple ansible playbook to take clean ubuntu 18.04 to CUDA 10, PyTorch 1.0, fastai, miniconda heaven☆11Dec 16, 2018Updated 7 years ago
- We present a customizable computational tool, PathSeq2.0, to enable the discovery and identification of microbial sequences in metagenomi…☆12Jan 20, 2018Updated 8 years ago
- Code for "Reconstruction of plant--pollinator networks from observational data"☆20Apr 21, 2022Updated 4 years ago
- ☆22Sep 24, 2018Updated 7 years ago
- Published at Bioinformatics☆12Jul 4, 2024Updated 2 years ago
- FRAMA: From RNA-seq data to annotated mRNA assemblies☆12Sep 28, 2018Updated 7 years ago
- This project is the implementation of Li-Roth paper "Learning Question Classifiers" on TREC dataset☆12Mar 7, 2017Updated 9 years ago
- 🎤 quick library to extract pause lengths from audio files.☆33Jun 5, 2019Updated 7 years ago
- Easy Multiprocessing for Python☆42Nov 3, 2020Updated 5 years ago
- Simple, predictable pricing with DigitalOcean hosting • AdAlways know what you'll pay with monthly caps and flat pricing. Enterprise-grade infrastructure trusted by 600k+ customers.
- Personal theme that I use for iPython notebooks☆11Mar 17, 2018Updated 8 years ago
- A pipeline to rapidly detect exogenous DNA integration sites using DNA or RNA paired-end sequencing data☆12Apr 25, 2023Updated 3 years ago
- Yet Another Motif Discovery Algorithm☆53Jan 10, 2019Updated 7 years ago
- ☆14Jun 12, 2015Updated 11 years ago
- Simple sprite and game platform for Brython and/or Pygame.☆16Apr 12, 2024Updated 2 years ago
- Trying to apply deep learning to music analysis☆12May 26, 2017Updated 9 years ago
- Tokenize and clean strings in Python☆11Jan 11, 2018Updated 8 years ago
- ☆17May 15, 2024Updated 2 years ago
- Python Karnaugh Map☆11Aug 28, 2015Updated 10 years ago
- End-to-end encrypted email - Proton Mail • AdSpecial offer: 40% Off Yearly / 80% Off First Month. All Proton services are open source and independently audited for security.
- Docker for CRISPR Library Designer | https://genomebiology.biomedcentral.com/articles/10.1186/s13059-016-0915-2☆21May 30, 2022Updated 4 years ago
- Management and creation for custom tournaments and rankings for some sports☆14Mar 11, 2015Updated 11 years ago
- Full-length linear and circular transcript isoform reconstruction and quantification☆11Jun 17, 2024Updated 2 years ago
- ☆11Dec 16, 2020Updated 5 years ago
- A Max for Live device that turns continuous automation input into stair-stepped output.☆10Dec 5, 2022Updated 3 years ago
- ☆17Sep 12, 2024Updated last year
- Belief Revision based Caption Re-ranker with Visual Semantic Information. COLING 2022☆11Apr 13, 2025Updated last year
- Okapi BM25 with Go☆13Mar 28, 2023Updated 3 years ago
- Python toolkit for likelihood-ratio calibration of binary classifiers☆25Feb 21, 2023Updated 3 years ago
- 1-Click AI Models by DigitalOcean Gradient • AdDeploy popular AI models on DigitalOcean Gradient GPU virtual machines with just a single click. Zero configuration with optimized deployments.
- Predicting ncRNA-protein interaction using high-level features based on deep learning☆15May 2, 2020Updated 6 years ago
- ALFA: Annotation Landscape for Aligned Reads☆14Jun 30, 2020Updated 6 years ago
- ☆11Jun 6, 2024Updated 2 years ago
- Simple Kaldi model server for chain (nnet3) models in online recognition mode directly from a local microphone☆35Feb 18, 2022Updated 4 years ago
- Simple, easy, parallel map function for python☆10Feb 11, 2022Updated 4 years ago
- Current homepage yaml for glance☆15Mar 20, 2025Updated last year
- C to DCPU-16 compiler written in python.☆15Apr 14, 2012Updated 14 years ago