Alternatives and similar repositories for BRAINSTools:

Users that are interested in BRAINSTools are comparing it to the libraries listed below

• BioMedIA / MIRTK
  The Medical Image Registration ToolKit (MIRTK), the successor of the IRTK, contains common CMake build configuration files, core librarie…
  ☆193Updated 2 years ago
• lassoan / SlicerElastix
  This extension makes available Elastix medical image registration toolkit (http://elastix.isi.uu.nl/) available in Slicer.
  ☆51Updated 3 weeks ago
• ai-med / quickNAT_pytorch
  PyTorch Implementation of QuickNAT and Bayesian QuickNAT, a fast brain MRI segmentation framework with segmentation Quality control using…
  ☆103Updated 4 years ago
• gift-surg / NiftyMIC
  NiftyMIC is a research-focused toolkit for motion correction and volumetric image reconstruction of 2D ultra-fast MRI.
  ☆145Updated 3 years ago
• SlicerDMRI / SlicerDMRI
  Diffusion MRI analysis and visualization in 3D Slicer open source medical imaging platform.
  ☆78Updated 3 weeks ago
• NA-MIC / ProjectWeek
  Website for NA-MIC Project Weeks
  ☆85Updated this week
• pieper / dicomsort
  A project to provide custom sorting and renaming of dicom files
  ☆76Updated 7 months ago
• BioMedIA / IRTK
  The Image Registration Toolkit
  ☆79Updated 6 years ago
• pyushkevich / greedy
  Very fast greedy diffeomorphic registration code
  ☆69Updated this week
• giesekow / deepvesselnet
  Implementation of the DeepVesselNet deep learning network
  ☆143Updated last year
• MIC-DKFZ / MITK-Diffusion
  MITK Diffusion - Official part of the Medical Imaging Interaction Toolkit
  ☆89Updated 5 months ago
• MASILab / SLANTbrainSeg
  Deep Whole Brain Segmentation Using SLANT Method
  ☆114Updated last year
• lassoan / SlicerSegmentationRecipes
  Recipes for common medical image segmentation tasks using 3D Slicer
  ☆54Updated 2 years ago
• InsightSoftwareConsortium / ScientificImageAnalysisVisualizationAndArtificialIntelligenceCourse
  ☆84Updated last year
• ai-med / QuickNATv2
  Fast Whole Brain Segmentation (Layers, codes and Pre-trained Models)
  ☆63Updated 5 years ago
• Cardiac-MR-Group-Lund / segment-open
  Segment Source Distribution
  ☆72Updated 2 years ago
• ANTsX / ANTsPyNet
  Pre-trained models and utilities for deep learning on medical images in Python
  ☆206Updated this week
• biolab-unige / nifti2dicom
  Convert 3D NIfTI images (and other formats supported by ITK) to DICOM 2D series
  ☆87Updated 8 years ago
• mvallieres / radiomics
  MATLAB programming tools for radiomics analysis
  ☆146Updated 5 years ago
• Slicer / SlicerLungCTAnalyzer
  This is a 3D Slicer extension for segmentation and spatial reconstruction of infiltrated, collapsed, and emphysematous areas in lung CT.
  ☆75Updated 4 months ago
• SuperElastix / SuperElastix
  Official SuperElastix repository
  ☆85Updated 5 years ago
• WCHN / CTseg
  Brain CT image segmentation, normalisation, skull-stripping and total brain/intracranial volume computation.
  ☆69Updated 6 months ago
• Slicer / SlicerNotebooks
  Examples that illustrate how to use 3D Slicer via Jupyter notebooks in Python
  ☆75Updated 2 years ago
• Slicer / ExtensionsIndex
  Slicer extensions index
  ☆70Updated this week
• bkainz / fetalReconstruction
  GPU accelerated source code for motion compensation of multi-stack MRI data
  ☆59Updated 5 years ago
• KitwareMedicalPublications / 2018-05-30-KRSCourseInBiomedicalImageAnalysisAndVisualization
  Kitware Course in Biomedical Image Analysis and Visualization: ITK
  ☆39Updated 6 years ago
• fepegar / vesseg
  Brain vessel segmentation using 3D convolutional neural networks
  ☆42Updated 2 years ago
• ellisdg / frangi3d
  Computes vesselness scores for 3-dimensional images.
  ☆70Updated 8 years ago
• medInria / medInria-public
  Open-source part of the medInria software
  ☆95Updated last month
• IPMI-ICNS-UKE / gdl-fire-4d
  General deep learning-based fast image registration framework for clinical thoracic 4D CT data
  ☆39Updated 6 years ago