Alternatives and similar repositories for pipedream:

Users that are interested in pipedream are comparing it to the libraries listed below

• jeffduda / NeuroBattery
  Using ANTs to process multiple MR image types for a single subject
  ☆24Updated 7 years ago
• CoBrALab / MAGeTbrain
  Multiple Automatically Generated Templates brain segmentation algorithm
  ☆48Updated 9 months ago
• LTS5 / cmp
  Connectome Mapper
  ☆39Updated 3 years ago
• demianw / tract_querier
  Implementation of the White Matter Query Language and associated tools for dMRI white matter tract extraction and analysis
  ☆28Updated last month
• BIC-MNI / minc
  OBSOLETE: Medical Image NetCDF, this package is now split into two parts: libminc ( https://github.com/BIC-MNI/libminc ) and minc-tools (…
  ☆34Updated 8 years ago
• Deep-MI / BrainPrint-legacy
  Python scripts for shape analysis of neuroimaging data (wrapping around shapeDNA and FreeSurfer)
  ☆20Updated 4 years ago
• trislett / TFCE_mediation
  Fast regression and mediation analysis of vertex or voxel MRI data with TFCE
  ☆30Updated last year
• raamana / visualqc
  VisualQC : assistive tool to ease the quality control workflow of neuroimaging data.
  ☆73Updated 9 months ago
• nipreps / dmriprep
  dMRIPrep is a robust and easy-to-use pipeline for preprocessing of diverse dMRI data. The transparent workflow dispenses of manual interv…
  ☆67Updated last year
• stnava / ANTsDoc
  Documentation for ANTs
  ☆16Updated 9 years ago
• preprocessed-connectomes-project / quality-assessment-protocol
  Scripts and documentation for the PCP's protocol for assessing data quality.
  ☆40Updated 3 years ago
• raamana / graynet
  Subject-wise networks from structural MRI, both vertex- and voxel-wise features (thickness, GM density, curvature, gyrification)
  ☆37Updated 11 months ago
• DevelopingHCP / structural-pipeline
  dHCP structural pipeline
  ☆17Updated 3 years ago
• Chaogan-Yan / DPARSF
  Data Processing Assistant for Resting-State fMRI
  ☆26Updated 11 years ago
• scilus / tractoflow
  TractoFlow: A robust, efficient and reproducible diffusion MRI pipeline leveraging Nextflow & Singularity
  ☆54Updated 6 months ago
• muschellij2 / fslr
  FSL-R Interface package
  ☆41Updated last month
• moloney / dcmstack
  DICOM to Nifti conversion with meta data preservation
  ☆74Updated 3 months ago
• stnava / ANTsTutorial
  Guide to tutorial materials for ANTs/R
  ☆46Updated 6 years ago
• neurospin / pypreprocess
  Preprocessing scripts for neuro imaging
  ☆107Updated last year
• Jfortin1 / EveTemplate
  JHU-MNI-ss (Eve) Template
  ☆13Updated 4 years ago
• johncolby / along-tract-stats
  A MATLAB toolbox for performing along-tract analysis of diffusion tensor imaging (DTI) MRI tractography data.
  ☆43Updated 12 years ago
• nipy / niwidgets
  Neuroimaging widgets for jupyter notebooks
  ☆87Updated 2 years ago
• nipreps / sdcflows
  Susceptibility Distortion Correction (SDC) workflows for EPI MR schemes
  ☆33Updated last week
• Mouse-Imaging-Centre / pydpiper
  Python code for flexible pipeline control
  ☆25Updated 2 years ago
• Qoala-T / QC
  Qoala-T is a supervised-learning tool for quality control of FreeSurfer segmented MRI data
  ☆76Updated 4 years ago
• LTS5 / connectomeviewer
  Software Application for the Visualization and Analysis of Multi-Modal Multi-Scale Network and Neuroimaging Data with Python
  ☆52Updated 7 years ago
• ncullen93 / neuroCombat
  Harmonizing neuroimaging data across scanners and sites
  ☆33Updated 4 years ago
• bbfrederick / rapidtide
  rapidtide - a suite of programs for doing time lag correlation analysis on fMRI data
  ☆77Updated this week
• Conxz / multiBrain
  A list of brain imaging datasets with multiple scans per subject. Feel free to update the list via 'pull requests'!
  ☆92Updated 3 weeks ago
• NIST-MNI / nist_mni_pipelines
  NIST-MNI image processing pipelines
  ☆10Updated last week