Alternatives and similar repositories for pipedream

Users that are interested in pipedream are comparing it to the libraries listed below

• jeffduda / NeuroBattery
  Using ANTs to process multiple MR image types for a single subject
  ☆25Updated 7 years ago
• CoBrALab / MAGeTbrain
  Multiple Automatically Generated Templates brain segmentation algorithm
  ☆50Updated last year
• raamana / visualqc
  VisualQC : assistive tool to ease the quality control workflow of neuroimaging data.
  ☆74Updated 2 months ago
• demianw / tract_querier
  Implementation of the White Matter Query Language and associated tools for dMRI white matter tract extraction and analysis
  ☆29Updated last month
• preprocessed-connectomes-project / quality-assessment-protocol
  Scripts and documentation for the PCP's protocol for assessing data quality.
  ☆41Updated 3 years ago
• FCP-INDI / C-PAC
  Configurable Pipeline for the Analysis of Connectomes
  ☆70Updated this week
• cMadan / openMorph
  Curated list of open-access databases with human structural MRI data
  ☆129Updated 6 years ago
• Deep-MI / BrainPrint-legacy
  Python scripts for shape analysis of neuroimaging data (wrapping around shapeDNA and FreeSurfer)
  ☆20Updated 4 years ago
• SIMEXP / niak
  GNU Octave library for connectivity analysis in large fMRI datasets
  ☆29Updated 2 years ago
• akeshavan / mindcontrol
  MindControl is an app for quality control of neuroimaging pipeline outputs. Demo:
  ☆54Updated 6 years ago
• johncolby / along-tract-stats
  A MATLAB toolbox for performing along-tract analysis of diffusion tensor imaging (DTI) MRI tractography data.
  ☆45Updated 12 years ago
• nipreps / dmriprep
  dMRIPrep is a robust and easy-to-use pipeline for preprocessing of diverse dMRI data. The transparent workflow dispenses of manual interv…
  ☆70Updated last year
• Conxz / multiBrain
  A list of brain imaging datasets with multiple scans per subject. Feel free to update the list via 'pull requests'!
  ☆97Updated 6 months ago
• maartenmennes / ICA-AROMA
  ICA-AROMA Software Package: a data-driven method to identify and remove head motion-related artefacts from functional MRI data.
  ☆101Updated last year
• nipreps / niworkflows
  Common workflows for MRI (anatomical, functional, diffusion, etc)
  ☆102Updated this week
• nighres / nighres
  Processing tools for high-resolution neuroimaging
  ☆71Updated 9 months ago
• scilus / tractoflow
  TractoFlow: A robust, efficient and reproducible diffusion MRI pipeline leveraging Nextflow & Singularity
  ☆61Updated 11 months ago
• LTS5 / cmp
  Connectome Mapper
  ☆39Updated 3 years ago
• ncullen93 / neuroCombat
  Harmonizing neuroimaging data across scanners and sites
  ☆35Updated 5 years ago
• spinicist / nanslice
  A Python implementation of 'dual-coding'
  ☆43Updated last year
• neurospin / pypreprocess
  Preprocessing scripts for neuro imaging
  ☆110Updated last year
• trislett / TFCE_mediation
  Fast regression and mediation analysis of vertex or voxel MRI data with TFCE
  ☆31Updated 2 years ago
• neurolabusc / NiiStat
  NiiStat is a set of Matlab scripts for analyzing neuroimaging data from clinical populations
  ☆32Updated 5 years ago
• CoBrALab / RABIES
  fMRI preprocessing pipeline and analysis tools adapted for rodent images. Visit the full documentation at https://rabies.readthedocs.io/
  ☆45Updated 3 weeks ago
• neurolabusc / fsl_sub
  parallel FSL processing without requiring SGE
  ☆27Updated 4 years ago
• TIGRLab / datman
  scripts for managing xnat, QC, and data analysis
  ☆17Updated 2 weeks ago
• Chaogan-Yan / DPARSF
  Data Processing Assistant for Resting-State fMRI
  ☆27Updated 12 years ago
• daducci / AMICO
  Accelerated Microstructure Imaging via Convex Optimization (AMICO) from diffusion MRI data
  ☆112Updated last month
• jmtyszka / bidskit
  Utility functions for working with DICOM and BIDS neuroimaging data
  ☆63Updated last month
• Qoala-T / QC
  Qoala-T is a supervised-learning tool for quality control of FreeSurfer segmented MRI data
  ☆77Updated 4 years ago