cookpa / pipedreamLinks
PipeDream - open source neuroimaging pipelines
☆16Updated 5 years ago
Alternatives and similar repositories for pipedream
Users that are interested in pipedream are comparing it to the libraries listed below
Sorting:
- Using ANTs to process multiple MR image types for a single subject☆25Updated 7 years ago
- Multiple Automatically Generated Templates brain segmentation algorithm☆49Updated 11 months ago
- Documentation for ANTs☆16Updated 10 years ago
- Connectome Mapper☆39Updated 3 years ago
- dHCP structural pipeline☆16Updated 3 years ago
- Implementation of the White Matter Query Language and associated tools for dMRI white matter tract extraction and analysis☆29Updated last week
- Python scripts for shape analysis of neuroimaging data (wrapping around shapeDNA and FreeSurfer)☆20Updated 4 years ago
- A reimplementation of MAGeTbrain using only ANTs tools.☆16Updated 2 years ago
- OBSOLETE: Medical Image NetCDF, this package is now split into two parts: libminc ( https://github.com/BIC-MNI/libminc ) and minc-tools (…☆35Updated 8 years ago
- FSL-R Interface package☆41Updated 4 months ago
- Python code for flexible pipeline control☆26Updated 2 years ago
- VisualQC : assistive tool to ease the quality control workflow of neuroimaging data.☆73Updated 11 months ago
- atlasBREX: Automated averaged template-derived brain extraction in animal MRI☆16Updated last year
- Scripts and documentation for the PCP's protocol for assessing data quality.☆40Updated 3 years ago
- A Python implementation of 'dual-coding'☆42Updated last year
- Guide to tutorial materials for ANTs/R☆46Updated 6 years ago
- dMRIPrep is a robust and easy-to-use pipeline for preprocessing of diverse dMRI data. The transparent workflow dispenses of manual interv…☆66Updated last year
- small mammals brain MRI☆16Updated last year
- GNU Octave library for connectivity analysis in large fMRI datasets☆29Updated 2 years ago
- Medical image format converter: from raw Bruker ParaVision to nifti.☆31Updated last year
- NiiStat is a set of Matlab scripts for analyzing neuroimaging data from clinical populations☆32Updated 4 years ago
- NIST-MNI image processing pipelines☆12Updated 2 months ago
- niimath - a clone of fslmaths. Try the live demo:☆62Updated last week
- dMRI based fiber tracking using parallel transport tractography☆25Updated 3 months ago
- Quickshear Defacing for Neuroimages☆11Updated 2 years ago
- Harmonizing neuroimaging data across scanners and sites☆34Updated 4 years ago
- Subject-wise networks from structural MRI, both vertex- and voxel-wise features (thickness, GM density, curvature, gyrification)☆37Updated last year
- TractoFlow: A robust, efficient and reproducible diffusion MRI pipeline leveraging Nextflow & Singularity☆56Updated 8 months ago
- Please visit our new location: https://github.com/tractometry/pyAFQ☆60Updated 7 months ago
- rapidtide - a suite of programs for doing time lag correlation analysis on fMRI data☆80Updated this week