delvendahl / miniMLLinks
A deep learning framework for synaptic event detection
☆17Updated 2 weeks ago
Alternatives and similar repositories for miniML
Users that are interested in miniML are comparing it to the libraries listed below
Sorting:
- Histology processing☆71Updated last month
- Fiber photometry analysis☆22Updated last week
- Fiber Photometry Modular Analysis Tool Suite☆40Updated 4 years ago
- A table containing imaging analysis tools for biology, with a focus on calcium imaging.☆52Updated 2 years ago
- miniscope analysis pipeline with interactive visualizations☆95Updated last year
- Repository for 2nd generation Bpod platform (formerly beta branch of Bpod repository)☆40Updated 2 weeks ago
- Tools to work with Allen Inst CCF data in matlab☆142Updated 3 months ago
- High level pandas-based API for batch analysis of Calcium Imaging data using CaImAn☆70Updated last month
- Bonsai package for controlling headborne, calcium imaging miniscopes☆12Updated last year
- Registration of cells across sessions.☆75Updated last year
- ☆52Updated last year
- ☆19Updated last year
- Repository for BehaviorDEPOT pipeline app files and source code☆38Updated last year
- 'minis' is a software for electrophysiological data analysis. It allows you to detect and analyse spontaneous postsynaptic potetnials/cur…☆11Updated 10 months ago
- Tools to register histological section images and cell count locations to mouse brain atlas☆28Updated 3 years ago
- CIAtah (pronounced cheetah): a software package for calcium imaging analysis of one- and two-photon imaging datasets. Documentation: http…☆99Updated 11 months ago
- Neuropixels trajectory explorer with the Allen CCF mouse atlas☆78Updated 6 months ago
- pyqt5 dependent applications for IBL sessions☆31Updated 3 weeks ago
- Image processing pipeline to correct motion artifacts and complex image distortions in neuronal calcium imaging data.☆26Updated last year
- Match suite2p ROIs between imaging sessions☆27Updated 6 years ago
- All things Miniscope v4☆144Updated 2 years ago
- Extract regions of interest based on correlated pixel intensity☆24Updated 8 years ago
- Calcium Data Extraction and Analysis☆46Updated 2 years ago
- A MINiscope 1-photon-based Calcium Imaging Signal Extraction PIPEline.☆62Updated last year
- Collection of probe description for probeinterface☆16Updated 3 weeks ago
- Rendering anatomical heatmaps with brainrender and matplotlib☆44Updated 3 weeks ago
- Calcium imaging inter-session alignment☆13Updated this week
- EXTRACT is a tractable and robust automated cell extraction tool for calcium imaging, which extracts the activities of cells as time seri…☆81Updated 10 months ago
- Platform for Calcium Imaging analysis. DEPRECATED.☆62Updated last year
- Serial-section automated anatomy extension for ScanImage☆17Updated 2 months ago