delvendahl / miniMLLinks
A deep learning framework for synaptic event detection
☆17Updated last month
Alternatives and similar repositories for miniML
Users that are interested in miniML are comparing it to the libraries listed below
Sorting:
- miniscope analysis pipeline with interactive visualizations☆95Updated last year
- Histology processing☆67Updated 3 weeks ago
- Registration of cells across sessions.☆75Updated 11 months ago
- Fiber photometry analysis☆22Updated 4 months ago
- Match suite2p ROIs between imaging sessions☆27Updated 6 years ago
- Fiber Photometry Modular Analysis Tool Suite☆40Updated 4 years ago
- Tools to work with Allen Inst CCF data in matlab☆138Updated 3 weeks ago
- Neuropixels trajectory explorer with the Allen CCF mouse atlas☆76Updated 3 months ago
- pyqt5 dependent applications for IBL sessions☆28Updated this week
- A table containing imaging analysis tools for biology, with a focus on calcium imaging.☆50Updated last year
- 'minis' is a software for electrophysiological data analysis. It allows you to detect and analyse spontaneous postsynaptic potetnials/cur…☆11Updated 7 months ago
- CIAtah (pronounced cheetah): a software package for calcium imaging analysis of one- and two-photon imaging datasets. Documentation: http…☆93Updated 8 months ago
- ☆52Updated 11 months ago
- High level pandas-based API for batch analysis of Calcium Imaging data using CaImAn☆70Updated 2 months ago
- Repository for BehaviorDEPOT pipeline app files and source code☆38Updated 10 months ago
- A MINiscope 1-photon-based Calcium Imaging Signal Extraction PIPEline.☆61Updated last year
- Tools to register histological section images and cell count locations to mouse brain atlas☆27Updated 3 years ago
- Image processing pipeline to correct motion artifacts and complex image distortions in neuronal calcium imaging data.☆26Updated last year
- Repository for 2nd generation Bpod platform (formerly beta branch of Bpod repository)☆36Updated last week
- Calcium Data Extraction and Analysis☆45Updated 2 years ago
- Collection of probe description for probeinterface☆16Updated 3 weeks ago
- Bonsai package for controlling headborne, calcium imaging miniscopes☆12Updated last year
- Calibrated inference of spiking from calcium ΔF/F data using deep networks☆150Updated last week
- Pre-processing pipeline for widefield data☆11Updated 4 years ago
- Platform for Calcium Imaging analysis. DEPRECATED.☆61Updated last year
- EXTRACT is a tractable and robust automated cell extraction tool for calcium imaging, which extracts the activities of cells as time seri…☆75Updated 8 months ago
- Free, platform independent, behavior tracking software.☆138Updated last month
- For displaying spherically corrected visual stimulus on a flat screen.☆9Updated 7 months ago
- Calcium imaging inter-session alignment☆11Updated last week
- Multi-probe trajectory planning in an intuitive 3D environment☆56Updated 3 weeks ago