The Cytomine-WebUI is the official front-end for Cytomine, developed in Vue 2. You will find more information about the Cytomine project on our website.
☆22Oct 1, 2025Updated 7 months ago
Alternatives and similar repositories for Cytomine-Web-UI
Users that are interested in Cytomine-Web-UI are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- Modeling Latent Flow Structure using Hodge Decomposition☆17Mar 13, 2025Updated last year
- FastReseg for detection and correction of cell segmentation error based on spatial profile of transcripts.☆15Apr 30, 2026Updated last week
- Pixie pipeline described in Liu et al., Robust phenotyping of highly multiplexed tissue imaging data using pixel-level clustering☆12Aug 3, 2023Updated 2 years ago
- Whole slide image registration through wsireg in napari.☆12Apr 21, 2023Updated 3 years ago
- AI-enabled Mouse Organ Segmentation☆14Jan 26, 2021Updated 5 years ago
- Bare Metal GPUs on DigitalOcean Gradient AI • AdPurpose-built for serious AI teams training foundational models, running large-scale inference, and pushing the boundaries of what's possible.
- A visualization app for 3D-registered data processed in ABBA and QuPath☆20Oct 21, 2022Updated 3 years ago
- A Keras 3 Implementation of "SegFormer: Simple and Efficient Design for Semantic Segmentation with Transformers"☆10Mar 1, 2024Updated 2 years ago
- 3D segmentation for cells and organoids of 3D multichannel images☆32Jun 24, 2025Updated 10 months ago
- Imaris file format reader☆15Aug 20, 2025Updated 8 months ago
- ☆14Jan 23, 2026Updated 3 months ago
- Pipeline for generating RNAseq-based cancer patient reports☆12Apr 15, 2026Updated 3 weeks ago
- visualization tools for exon/junction coverage☆11Dec 30, 2019Updated 6 years ago
- Example FaaS stack for Raspberry Pi (ARM) to integrate with Github events.☆10Mar 31, 2017Updated 9 years ago
- Marker gene profile estimation method used in NeuroExpresso manuscript☆14Jul 11, 2019Updated 6 years ago
- Managed Kubernetes at scale on DigitalOcean • AdDigitalOcean Kubernetes includes the control plane, bandwidth allowance, container registry, automatic updates, and more for free.
- ☆13Dec 19, 2018Updated 7 years ago
- An R package for annotation of circular RNAs☆11Mar 30, 2020Updated 6 years ago
- CircRNA testing and ploting R package☆10Nov 23, 2020Updated 5 years ago
- A spatial omics data analysis tool that enables both unsupervised and supervised discovery of complex tissue cellular neighborhoods from …☆26Jan 31, 2026Updated 3 months ago
- ☆10Nov 29, 2022Updated 3 years ago
- Codes to regenerate figures for mutagen paper☆12Apr 8, 2021Updated 5 years ago
- ☆10Dec 17, 2019Updated 6 years ago
- Computes trajectories for evolutionary dynamics.☆15Oct 6, 2020Updated 5 years ago
- A collection of papers about package management we can all ready!☆11May 15, 2019Updated 6 years ago
- Virtual machines for every use case on DigitalOcean • AdGet dependable uptime with 99.99% SLA, simple security tools, and predictable monthly pricing with DigitalOcean's virtual machines, called Droplets.
- Published at Bioinformatics☆12Jul 4, 2024Updated last year
- Analysis of snRNA-seq2 data coming from 3 months old mouse liver, dissecting the influence ploidy has on gene expression.☆14Dec 6, 2021Updated 4 years ago
- Testing a neutral evolution model on cancer sequencing data☆10Feb 17, 2021Updated 5 years ago
- Inferring selection in cancer sequencing data using ABC and population based simulations☆12Jan 31, 2021Updated 5 years ago
- An R package for extracting mutational signatures from vcf files☆11Feb 13, 2025Updated last year
- A package for the analysis of Imaging Mass Cytometry data☆15Mar 25, 2026Updated last month
- Efficient subtyping of ovarian cancer histopathology whole slide images using active sampling in multiple instance learning☆11Mar 19, 2024Updated 2 years ago
- Optimal gating strategies for flow and mass cytometry.☆16Nov 5, 2025Updated 6 months ago
- an efficient data integration method for multiple spatial transcriptomics data with non- cluster-relevant effects such as the complex batc…☆13Dec 15, 2025Updated 4 months ago
- GPU virtual machines on DigitalOcean Gradient AI • AdGet to production fast with high-performance AMD and NVIDIA GPUs you can spin up in seconds. The definition of operational simplicity.
- ☆11Jun 23, 2017Updated 8 years ago
- Code for the paper `Multiscale topology classifies and quantifies cell types in subcellular spatial transcriptomics"☆13Apr 23, 2024Updated 2 years ago
- ☆12Jun 16, 2023Updated 2 years ago
- ☆11Jul 18, 2022Updated 3 years ago
- ☆22Jan 28, 2025Updated last year
- VirusScan Pipeline☆12Feb 7, 2026Updated 3 months ago
- A python package for learning mutational signatures and their multidimensional genomic properties☆15Sep 1, 2020Updated 5 years ago