Alternatives and similar repositories for r-base-feedstock

Users that are interested in r-base-feedstock are comparing it to the libraries listed below

• Bioconductor / DelayedArray
  A unified framework for working transparently with on-disk and in-memory array-like datasets
  ☆27Updated last month
• LTLA / basilisk
  Clone of the Bioconductor repository for the basilisk package.
  ☆27Updated 2 weeks ago
• stemangiola / tidySingleCellExperiment
  Brings SingleCellExperiment objects to the tidyverse
  ☆36Updated 5 months ago
• lgatto / tidies
  A Grammar of Data Manipulation for Omics Data
  ☆21Updated 4 years ago
• lcolladotor / biocthis
  Automate package and project setup for Bioconductor packages
  ☆53Updated 2 months ago
• lianos / sparrow
  Take command of your set enrichment analyses.
  ☆21Updated this week
• tidyomics / tidyomicsBlog
  the manifesto, workshops and tutorials of the tidy transcriptomics
  ☆13Updated last month
• waldronlab / GSEABenchmarkeR
  Reproducible GSEA Benchmarking
  ☆13Updated 3 weeks ago
• willtownes / glmpca
  ☆94Updated last year
• SaskiaFreytag / schex
  ☆74Updated last year
• dynverse / dynplot
  Visualising single-cell trajectories, including comparisons between two models 📈
  ☆31Updated 3 years ago
• laurenhsu1 / corral
  Dimensionality reduction and batch integration methods for single cell data
  ☆16Updated 2 years ago
• lmweber / diffcyt
  R package for differential discovery analyses in high-dimensional cytometry data
  ☆20Updated 3 months ago
• kevinblighe / RegParallel
  Standard regression functions in R enabled for parallel processing over large data-frames.
  ☆38Updated last year
• Bioconductor / TENxBrainAnalysis
  R scripts for analyzing the 1.3 million brain cell data set from 10X Genomics
  ☆12Updated 2 years ago
• Bioconductor / BuildABiocWorkshop
  Template for building a bioconductor workshop package using github actions
  ☆20Updated 10 months ago
• Bioconductor / BiocParallel
  Bioconductor facilities for parallel evaluation
  ☆67Updated last week
• areyesq89 / SummarizedBenchmark
  SummarizedBenchmark defines a flexible framework for benchmarking computational methods in R.
  ☆15Updated 3 years ago
• QuantGen / BEDMatrix
  A matrix-like wrapper around PLINK .bed files
  ☆19Updated 9 months ago
• markrobinsonuzh / cytofWorkflow
  ☆16Updated last year
• waldronlab / cBioPortalData
  Integrate the cancer genomics portal, cBioPortal, using MultiAssayExperiment
  ☆33Updated 3 weeks ago
• Shians / CellBench
  R package for benchmarking single cell analysis methods
  ☆31Updated last year
• SingleR-inc / SingleRBook-base
  See https://github.com/LTLA/SingleRBook for the latest version of this content.
  ☆11Updated 2 years ago
• carpentries-incubator / bioc-project
  Introduction to the Bioconductor project
  ☆18Updated 3 weeks ago
• Bioconductor / S4Vectors
  Foundation of vector-like and list-like containers in Bioconductor
  ☆17Updated last month
• goncalves-lab / waddR
  R package for detecting differential distributions using a statistical test based on the wasserstein distance
  ☆26Updated 2 years ago
• leekgroup / recount
  R package for the recount2 project. Documentation website: http://leekgroup.github.io/recount/
  ☆41Updated 5 months ago
• csoneson / ExploreModelMatrix
  Explore design matrices interactively with R/Shiny
  ☆37Updated last month
• LTLA / SingleCellThoughts
  Assorted thoughts, explanations and justifications for code in the scran package and the simpleSingleCell workflow.
  ☆44Updated 4 years ago
• nullranges / nullranges
  Modular package for generation of sets of ranges representing the null hypothesis. These can take the form of bootstrapped ranges (bootRa…
  ☆27Updated 2 months ago