Alternatives and similar repositories for Flusight-forecast-data

Users that are interested in Flusight-forecast-data are comparing it to the libraries listed below

• cdcepi / FluSight-forecast-hub
  ☆49Updated last week
• epiforecasts / EpiNow
  Estimate Realtime Case Counts and Time-varying Epidemiological Parameters
  ☆33Updated 2 years ago
• epiforecasts / socialmixr
  Derive social mixing matrices from survey data.
  ☆43Updated this week
• mrc-ide / EpiEstim
  A tool to estimate time varying instantaneous reproduction number during epidemics
  ☆101Updated 2 weeks ago
• mrc-ide / squire
  SEIR transmission model of COVID-19. Documentation at:
  ☆51Updated last year
• ImperialCollegeLondon / epidemia
  epidemia package
  ☆49Updated 3 years ago
• midas-network / covid19-scenario-modeling-hub_archive
  COVID-19 Scenario Modeling Hub
  ☆67Updated 8 months ago
• epiforecasts / EpiNow2
  Estimate Realtime Case Counts and Time-varying Epidemiological Parameters
  ☆133Updated this week
• EpiModel / EpiModel-Gallery
  Gallery of Network-Based Epidemic Model Templates for EpiModel
  ☆55Updated last year
• adrian-lison / EpiSewer
  An R package and Bayesian generative model to estimate epidemiological parameters from wastewater concentration measurements over time.
  ☆23Updated this week
• epiforecasts / scoringutils
  Utilities for Scoring and Assessing Predictions
  ☆60Updated last month
• reichlab / covidHubUtils
  Utility functions for the COVID-19 forecast hub
  ☆18Updated last year
• WHO-Collaboratory / collaboratory-epiparameter-community
  ☆43Updated 4 months ago
• kpzoo / EpiFilter
  Optimised estimates of reproduction numbers over time, which extract more information from an incidence curve than many conventional appr…
  ☆22Updated 2 years ago
• biouea / covidhm
  ☆23Updated 4 years ago
• carolinecolijn / distancing-impact-covid19
  Model and preprint estimating impact of physical distancing measures
  ☆15Updated 5 years ago
• CDCgov / wastewater-informed-covid-forecasting
  Wastewater-informed COVID-19 forecasting models submitted to the COVID-19 Forecast Hub
  ☆49Updated this week
• epinowcast / epinowcast
  A modular Bayesian framework for real-time infectious disease surveillance. Provides tools for nowcasting, reproduction number estimation…
  ☆62Updated this week
• midas-network / flu-scenario-modeling-hub_archive
  Flu Scenario Modeling Hub
  ☆12Updated 8 months ago
• adamkucharski / 2020-cov-tracing
  Accompanying code for: Kucharski AJ, Klepac P et al. Effectiveness of isolation, testing, contact tracing, and physical distancing on red…
  ☆13Updated 3 years ago
• mrc-ide / individual
  R Package for individual based epidemiological models
  ☆32Updated 5 months ago
• mac-theobio / McMasterPandemic
  SEIR+ model
  ☆19Updated 5 months ago
• jstockwin / EpiEstimApp
  Source code for the EpiEstim app.
  ☆35Updated 5 months ago
• covidestim / covidestim
  Bayesian nowcasting with adjustment for delayed and incomplete reporting to estimate COVID-19 infections in the United States
  ☆27Updated 5 months ago
• cobeylab / Rt_estimation
  Code to test Rt estimates against synthetic data
  ☆18Updated 5 years ago
• mrc-ide / sircovid
  ☆29Updated 7 months ago
• JuanLopezMartin / MRPCaseStudy
  An introduction to Multilevel Modeling and Poststratification (MRP) and some of its extensions.
  ☆40Updated 3 years ago
• kieshaprem / synthetic-contact-matrices
  Updates to the synthetic contact matrices
  ☆39Updated 2 years ago
• epiverse-trace / epiparameter
  R package with classes and helper functions for working with epidemiological parameters and access to a library of epidemiological parame…
  ☆35Updated last week
• rafalab / excessmort
  R package for estimating excess deaths from daily count data
  ☆21Updated last month