Biomedical Question Answering Datasets.
☆131Apr 30, 2025Updated last year
Alternatives and similar repositories for biomedical-qa-datasets
Users that are interested in biomedical-qa-datasets are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- Code and data for Cell-o1.☆28Sep 19, 2025Updated 9 months ago
- [NeurIPS 2024 Datasets and Benchmark Track Oral] MedCalc-Bench: Evaluating Large Language Models for Medical Calculations☆92Dec 18, 2025Updated 6 months ago
- [COLM 2024] Large Language Models as Biomedical Hypothesis Generators: A Comprehensive Evaluation☆15Jul 15, 2024Updated last year
- Code repository for MMUGL: Multi-modal Graph Learning over UMLS Knowledge Graphs☆11Dec 7, 2023Updated 2 years ago
- Medical Question Answering Dataset of 47,457 QA pairs created from 12 NIH websites☆455Oct 17, 2023Updated 2 years ago
- Serverless GPU API endpoints on Runpod - Get Bonus Credits • AdSkip the infrastructure headaches. Auto-scaling, pay-as-you-go, no-ops approach lets you focus on innovating your application.
- [EMNLP 2024] This is the code for our paper "BMRetriever: Tuning Large Language Models as Better Biomedical Text Retrievers".☆26Sep 19, 2024Updated last year
- ☆34Mar 7, 2026Updated 3 months ago
- Code for the MedRAG toolkit☆576May 8, 2025Updated last year
- Fast search index for SPLADE sparse retrieval models implemented in Python using Numpy and Numba☆38Oct 16, 2025Updated 8 months ago
- Multimodal Question Answering in the Medical Domain: A summary of Existing Datasets and Systems☆317Oct 17, 2023Updated 2 years ago
- PMC-Patients☆110Jun 7, 2024Updated 2 years ago
- diagnosis_zero, R1 Zero reproduce on disease diagnosis☆33Jul 24, 2025Updated 11 months ago
- Source codes and datasets for How well do Large Language Models perform in Arithmetic tasks?☆57Apr 17, 2023Updated 3 years ago
- Code for AttentionMeSH☆17Oct 5, 2018Updated 7 years ago
- Managed Database hosting by DigitalOcean • AdPostgreSQL, MySQL, MongoDB, Kafka, Valkey, and OpenSearch available. Automatically scale up storage and focus on building your apps.
- Code for the paper "Clinical Reading Comprehension: A Thorough Analysis of the emrQA Dataset" (ACL 2020)☆18May 9, 2020Updated 6 years ago
- TrialPanorama: Developing Large Language Models Using One Million Clinical Trials☆27Jun 20, 2026Updated last week
- ☆72May 31, 2022Updated 4 years ago
- PMC-Patients: A Large-scale Dataset of Patient Summaries and Relations for Benchmarking Retrieval-based Clinical Decision Support Systems…☆81Dec 20, 2023Updated 2 years ago
- CODER: Knowledge infused cross-lingual medical term embedding for term normalization. [JBI, ACL-BioNLP 2022]☆80Jun 28, 2022Updated 4 years ago
- A near real-time named-entity recognizer☆66May 20, 2026Updated last month
- Medical reasoning using large language models☆93Jan 9, 2024Updated 2 years ago
- PubMedQA: A Dataset for Biomedical Research Question Answering☆427Apr 18, 2023Updated 3 years ago
- Estimate similarity of medical concepts based on Unified Medical Language System (UMLS)☆16Jan 17, 2022Updated 4 years ago
- Deploy open-source AI quickly and easily - Special Bonus Offer • AdRunpod Hub is built for open source. One-click deployment and autoscaling endpoints without provisioning your own infrastructure.
- A novel approach to evaluating AI agents on diagnostic accuracy in symptom checking tasks.☆26Jul 10, 2025Updated 11 months ago
- A specialized LLM for study search, study screening, and data extraction from medical literature.☆31Jun 20, 2026Updated last week
- Code for the EACL 2021 Paper: Clinical Outcome Prediction from Admission Notes using Self-Supervised Knowledge Integration☆99Jul 31, 2024Updated last year
- BioELMo is a biomedical version of embeddings from language model (ELMo), pre-trained on PubMed abstracts.☆32Dec 3, 2019Updated 6 years ago
- Tools for curating biomedical training data for large-scale language modeling☆502Dec 9, 2024Updated last year
- Repo for our work "Systematic Evaluation of Large Vision-Language Models for Surgical Artificial Intelligence"☆21Jun 2, 2025Updated last year
- BioBART: Pretraining and Evaluation of A Biomedical Generative Language Model [ACL-BioNLP 2022]☆52Oct 26, 2022Updated 3 years ago
- Code and data for "Medical Dialogue Generation via Dual Flow Modeling" (ACL 2023 Findings)☆14Nov 22, 2023Updated 2 years ago
- The paper list of the review on LLMs in medicine - "Large Language Models Illuminate a Progressive Pathway to Artificial Healthcare Assis…☆269Dec 23, 2023Updated 2 years ago
- Managed Kubernetes at scale on DigitalOcean • AdDigitalOcean Kubernetes includes the control plane, bandwidth allowance, container registry, automatic updates, and more for free.
- The JSON file for the ICD-9-CM and ICD-10-CM hierarchy, including diagnosis codes and procedure codes☆14Jan 26, 2023Updated 3 years ago
- [EMNLP 2023 Findings] RECAP: Towards Precise Radiology Report Generation via Dynamic Disease Progression Reasoning☆28Jun 12, 2025Updated last year
- PyTorch implementation of CARE☆16Oct 6, 2023Updated 2 years ago
- Build system for the RTX-KG2pre biomedical knowledge graph, part of the ARAX reasoning system (https://github.com/RTXTeam/RTX)☆59Mar 4, 2026Updated 3 months ago
- Simulate patients with rare genetic conditions☆24Jul 28, 2023Updated 2 years ago
- Code for the emrQA question answering dataset☆153Feb 9, 2022Updated 4 years ago
- [TOIS 2024] Target-constrained Bidirectional Planning for Generation of Target-oriented Proactive Dialogue☆13Oct 18, 2025Updated 8 months ago