Biomedical Question Answering Datasets.
☆128Apr 30, 2025Updated last year
Alternatives and similar repositories for biomedical-qa-datasets
Users that are interested in biomedical-qa-datasets are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- [NeurIPS 2024 Datasets and Benchmark Track Oral] MedCalc-Bench: Evaluating Large Language Models for Medical Calculations☆89Dec 18, 2025Updated 4 months ago
- Official repository of the MIRAGE benchmark☆204Feb 6, 2026Updated 2 months ago
- Medical Question Answering Dataset of 47,457 QA pairs created from 12 NIH websites☆453Oct 17, 2023Updated 2 years ago
- [EMNLP 2024] This is the code for our paper "BMRetriever: Tuning Large Language Models as Better Biomedical Text Retrievers".☆25Sep 19, 2024Updated last year
- ☆31Mar 7, 2026Updated last month
- AI Agents on DigitalOcean Gradient AI Platform • AdBuild production-ready AI agents using customizable tools or access multiple LLMs through a single endpoint. Create custom knowledge bases or connect external data.
- Code for the MedRAG toolkit☆549May 8, 2025Updated 11 months ago
- Fast search index for SPLADE sparse retrieval models implemented in Python using Numpy and Numba☆38Oct 16, 2025Updated 6 months ago
- Multimodal Question Answering in the Medical Domain: A summary of Existing Datasets and Systems☆318Oct 17, 2023Updated 2 years ago
- PMC-Patients☆107Jun 7, 2024Updated last year
- diagnosis_zero, R1 Zero reproduce on disease diagnosis☆34Jul 24, 2025Updated 9 months ago
- Source codes and datasets for How well do Large Language Models perform in Arithmetic tasks?☆57Apr 17, 2023Updated 3 years ago
- Code for AttentionMeSH☆17Oct 5, 2018Updated 7 years ago
- Code for the paper "Clinical Reading Comprehension: A Thorough Analysis of the emrQA Dataset" (ACL 2020)☆18May 9, 2020Updated 5 years ago
- TrialPanorama: Developing Large Language Models Using One Million Clinical Trials☆25Dec 26, 2025Updated 4 months ago
- Deploy on Railway without the complexity - Free Credits Offer • AdConnect your repo and Railway handles the rest with instant previews. Quickly provision container image services, databases, and storage volumes.
- ☆71May 31, 2022Updated 3 years ago
- PMC-Patients: A Large-scale Dataset of Patient Summaries and Relations for Benchmarking Retrieval-based Clinical Decision Support Systems…☆77Dec 20, 2023Updated 2 years ago
- VinDr-SpineXR: A deep learning framework forspinal lesions detection and classification from radiographs☆29Jul 1, 2024Updated last year
- CODER: Knowledge infused cross-lingual medical term embedding for term normalization. [JBI, ACL-BioNLP 2022]☆79Jun 28, 2022Updated 3 years ago
- A corpus of Biomedical papers annotated with mentions of UMLS entities.☆344Nov 9, 2021Updated 4 years ago
- PubMedQA: A Dataset for Biomedical Research Question Answering☆418Apr 18, 2023Updated 3 years ago
- Estimate similarity of medical concepts based on Unified Medical Language System (UMLS)☆16Jan 17, 2022Updated 4 years ago
- A specialized LLM for study search, study screening, and data extraction from medical literature.☆28Mar 10, 2025Updated last year
- Code for the EACL 2021 Paper: Clinical Outcome Prediction from Admission Notes using Self-Supervised Knowledge Integration☆98Jul 31, 2024Updated last year
- Deploy on Railway without the complexity - Free Credits Offer • AdConnect your repo and Railway handles the rest with instant previews. Quickly provision container image services, databases, and storage volumes.
- BioELMo is a biomedical version of embeddings from language model (ELMo), pre-trained on PubMed abstracts.☆32Dec 3, 2019Updated 6 years ago
- Tools for curating biomedical training data for large-scale language modeling☆498Dec 9, 2024Updated last year
- Repo for our work "Systematic Evaluation of Large Vision-Language Models for Surgical Artificial Intelligence"☆20Jun 2, 2025Updated 10 months ago
- BioBART: Pretraining and Evaluation of A Biomedical Generative Language Model [ACL-BioNLP 2022]☆52Oct 26, 2022Updated 3 years ago
- Code associated with the paper: "Few-Shot Self-Rationalization with Natural Language Prompts"☆13Apr 27, 2022Updated 4 years ago
- Code and data for "Medical Dialogue Generation via Dual Flow Modeling" (ACL 2023 Findings)☆14Nov 22, 2023Updated 2 years ago
- 🐳 PyLoader: An asynchronous Python dataloader for loading big datasets, supporting PyTorch and TensorFlow 2.x.☆11Aug 29, 2021Updated 4 years ago
- The paper list of the review on LLMs in medicine - "Large Language Models Illuminate a Progressive Pathway to Artificial Healthcare Assis…☆265Dec 23, 2023Updated 2 years ago
- The JSON file for the ICD-9-CM and ICD-10-CM hierarchy, including diagnosis codes and procedure codes☆13Jan 26, 2023Updated 3 years ago
- Virtual machines for every use case on DigitalOcean • AdGet dependable uptime with 99.99% SLA, simple security tools, and predictable monthly pricing with DigitalOcean's virtual machines, called Droplets.
- [EMNLP 2023 Findings] RECAP: Towards Precise Radiology Report Generation via Dynamic Disease Progression Reasoning☆28Jun 12, 2025Updated 10 months ago
- PyTorch implementation of CARE☆16Oct 6, 2023Updated 2 years ago
- Simulate patients with rare genetic conditions☆24Jul 28, 2023Updated 2 years ago
- Code for the emrQA question answering dataset☆153Feb 9, 2022Updated 4 years ago
- CliniQG4QA: Generating Diverse Questions for Domain Adaptation of Clinical Question Answering☆23Feb 26, 2021Updated 5 years ago
- [TOIS 2024] Target-constrained Bidirectional Planning for Generation of Target-oriented Proactive Dialogue☆13Oct 18, 2025Updated 6 months ago
- ☆14Jan 6, 2025Updated last year