Alternatives and similar repositories for atlases:

Users that are interested in atlases are comparing it to the libraries listed below

• MASILab / Synb0-DISCO
  Distortion correction of diffusion weighted MRI without reverse phase-encoding scans or field-maps
  ☆66Updated 7 months ago
• ntustison / CrossLong
  Nature is a language---can't you read?
  ☆11Updated 3 years ago
• Qoala-T / QC
  Qoala-T is a supervised-learning tool for quality control of FreeSurfer segmented MRI data
  ☆75Updated 3 years ago
• bids-apps / freesurfer
  BIDS app wrapping recon-all from FreeSurfer
  ☆42Updated 3 months ago
• HumanBrainED / NHP-BrainExtraction
  ☆34Updated 2 years ago
• MASILab / PreQual
  An automated pipeline for integrated preprocessing and quality assurance of diffusion weighted MRI images
  ☆46Updated 6 months ago
• PennLINC / aslprep
  Preprocessing of arterial spin labeling (ASL) data
  ☆46Updated this week
• ExploreASL / ExploreASL
  ExploreASL: releases can be found in the main branch or within the releases tab. If you want to contribute, please contact us at h.j.muts…
  ☆49Updated this week
• ottaviadipasquale / react-fmri
  REACT: Receptor-Enriched Analysis of functional Connectivity by Targets
  ☆17Updated last year
• Deep-MI / fsqc
  A set of quality control scripts for FreeSurfer- and FastSurfer-processed structural MRI data
  ☆61Updated 3 months ago
• Conxz / multiBrain
  A list of brain imaging datasets with multiple scans per subject. Feel free to update the list via 'pull requests'!
  ☆92Updated 2 years ago
• kwagstyl / surface_tools
  Tools for mesh surface-based operations
  ☆35Updated 5 years ago
• nighres / nighres
  Processing tools for high-resolution neuroimaging
  ☆70Updated 2 months ago
• hMRI-group / hMRI-toolbox
  A toolbox for quantitative MRI and in vivo histology using MRI (hMRI)
  ☆62Updated this week
• sameerd / DiffusionTensorImaging
  Single Shell Free Water Elimination Model for Diffusion Tensor Imaging
  ☆22Updated last year
• faskowit / multiAtlasTT
  multi atlas transfer tools for neuroimaging (maTT)
  ☆63Updated 3 months ago
• srikash / presurfer
  Scripts to prepare MP2RAGE for Freesurfer
  ☆25Updated last year
• Washington-University / gradunwarp
  Gradient Unwarping in Python
  ☆34Updated last month
• ecr05 / MSM_HOCR
  Multimodal Surface Matching with Higher order Clique Reduction: Mac OS and Linux binaries
  ☆37Updated 2 years ago
• gbarisano / alps
  Bash script to compute DTI-ALPS
  ☆42Updated 3 weeks ago
• baranaydogan / purifibre
  Purifibre removes spurious streamlines from tractograms
  ☆10Updated 2 years ago
• mezera / mrQ
  mrQ_BoxJoinBox
  ☆22Updated last year
• rordenlab / niimath
  niimath - a clone of fslmaths. Try the live demo:
  ☆59Updated last month
• nipreps / dmriprep
  dMRIPrep is a robust and easy-to-use pipeline for preprocessing of diverse dMRI data. The transparent workflow dispenses of manual interv…
  ☆65Updated last year
• openneuropet / PET_pipelines
  A suite of brain PET processing pipelines
  ☆13Updated last month
• NYU-DiffusionMRI / DESIGNER-v1
  Diffusion parameter EStImation with Gibbs and NoisE Removal pipeline
  ☆51Updated 11 months ago
• ucl-pond / SuStaInMatlab
  Subtype and Stage Inference [Young+, Nature Communications 2018]
  ☆11Updated 3 years ago
• isebenius / MIND
  This repository contains a Python implementation of Morphometric INverse Divergence (MIND) calculation for the estimation of structural s…
  ☆29Updated 10 months ago
• HALFpipe / HALFpipe
  ENIGMA HALFpipe is a user-friendly software that facilitates reproducible analysis of fMRI data
  ☆80Updated this week