Alternatives and similar repositories for hcp2bids

Users that are interested in hcp2bids are comparing it to the libraries listed below

• bids-apps / HCPPipelines
  A BIDS App for minimal preprocessing using the HCP Pipelines
  ☆35Updated 7 months ago
• SIMEXP / load_confounds
  Load fMRIprep confounds in python
  ☆37Updated 3 years ago
• arielletambini / denoiser
  Nuisance removal tool for fMRI data
  ☆56Updated last year
• HBClab / NiBetaSeries
  Nipype implementation of BetaSeries Correlations (Beta)
  ☆34Updated 2 years ago
• MidnightScanClub / MSCcodebase
  The Midnight Scanning Club Codebase
  ☆34Updated 6 years ago
• caseypaquola / BigBrainWarp
  BigBrainWarp
  ☆24Updated last week
• faskowit / multiAtlasTT
  multi atlas transfer tools for neuroimaging (maTT)
  ☆64Updated 7 months ago
• murraylab / brainsmash
  Brain Surrogate Maps with Autocorrelated Spatial Heterogeneity
  ☆47Updated last year
• TingsterX / alignment_macaque-human
  cross-species alignment (joint-embedding between human and macaque)
  ☆28Updated 3 years ago
• danjgale / surfplot
  A package for publication-ready brain surface figures
  ☆62Updated 10 months ago
• PennLINC / xcpEngine
  Official public repository for the XCP Engine. This tool is deprecated in favor of XCP-D and ASLPrep.
  ☆65Updated 2 years ago
• SIMEXP / fmriprep-slurm
  Generate and run SLURM jobs on HPCs
  ☆12Updated 2 years ago
• bids-apps / freesurfer
  BIDS app wrapping recon-all from FreeSurfer
  ☆42Updated 7 months ago
• ReproNim / reproin
  A setup for automatic generation of shareable, version-controlled BIDS datasets from MR scanners
  ☆49Updated last month
• kfinc / nilearn-task-networks
  Tutorials for task-based activation and network analysis using Python based modules: Nilearn and Nistats. Notebooks prepared on Neurohack…
  ☆26Updated 6 years ago
• miykael / parcellation_fragmenter
  Fragments FreeSurfer parcellation annotation in N-equal sized parcels
  ☆28Updated 4 years ago
• demidenm / PyReliMRI
  Python-based Reliability in MRI: Calculating Group level and Individual Level Similarity between runs and sessions.
  ☆36Updated 11 months ago
• andrewjahn / MRtrix_Analysis_Scripts
  Scripts for analyzing diffusion data with MRtrix
  ☆16Updated 3 years ago
• StuartJO / plotSurfaceROIBoundary
  Plot the boundaries of ROIs on a surface
  ☆66Updated 2 months ago
• compneuro-ncu / fmridenoise
  Tool for automatic denoising, denoising strategies comparison, and functional connectivity data quality control.
  ☆47Updated 2 years ago
• poldracklab / ds003-post-fMRIPrep-analysis
  An exemplary task analysis workflow to run on OpenNeuro's ds000003 data, after preprocessing with fMRIPrep
  ☆31Updated 4 years ago
• bids-apps / rsHRF
  Resting state HRF estimation from BOLD-fMRI signal
  ☆35Updated 2 years ago
• alexteghipco / brainSurfer
  MATLAB toolbox for visualizing brain data on surfaces.
  ☆35Updated 6 months ago
• templateflow / templateflow
  The TemplateFlow Archive - A DataLad super-dataset
  ☆83Updated last month
• DCAN-Labs / abcd-hcp-pipeline
  bids application for processing functional MRI data, robust to scanner, acquisition and age variability.
  ☆55Updated 3 weeks ago
• nipreps / sdcflows
  Susceptibility Distortion Correction (SDC) workflows for EPI MR schemes
  ☆41Updated last week
• ColeLab / ActflowToolbox
  The Brain Activity Flow ("Actflow") Toolbox. Tools to quantify the relationship between connectivity and task activity through network si…
  ☆39Updated 3 months ago
• fiuneuro / brainconn
  A Python implementation of the brain connectivity toolbox. **Not actively maintained.**
  ☆32Updated 3 years ago
• miykael / fmriflows
  fmriflows is a consortium of many (dependent) fMRI analysis pipelines, including anatomical and functional pre-processing, univariate 1st…
  ☆67Updated 3 years ago
• NILAB-UvA / bidsify
  Tool to convert raw MRI datasets to BIDS-compatible datasets
  ☆33Updated 3 years ago